Gene Acel_1946 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1946 
Symbol 
ID4486365 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2203929 
End bp2204906 
Gene Length978 bp 
Protein Length325 aa 
Translation table11 
GC content63% 
IMG OID639730737 
Productribose-phosphate pyrophosphokinase 
Protein accessionYP_873704 
Protein GI117929153 
COG category[E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism 
COG ID[COG0462] Phosphoribosylpyrophosphate synthetase 
TIGRFAM ID[TIGR01251] ribose-phosphate pyrophosphokinase 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGGTA TCAGGCGGCA GGGTCAGAAG ACGCTCATGC TCTTCTCGGG GCGCGCCCAC 
CCCGAGCTTG CTGCCGAAGT GGCCGCGTGC CTGGGCATCG AGCCGACGCC GACGTCCGCC
TATGAATTCG CCAACGGCGA AATCTTCGTC CGCTTCGACG AGTCCGTGCG CGGCAGTGAC
GCGTTCGTGA TCCAAAGCCA CTGCGCCCCC ATCAACAAGT GGATCATGGA GCAGCTGATT
ATGGTCGATG CGCTCAAACG CGCGTCGGCC AAGCGCATCA CGGTCGTCGT CCCGTTCTAC
GGATACGCGC GTCAAGACAA GAAACACCGC GGTCGCGAGC CGATCTCAGC CCGGTTGATG
GCGGATCTCT TCAAAGCCGC CGGAGCCGAC CGGTTGATGG CCGTCGACCT CCACACCGCG
CAGATCCAAG GCTTCTTTGA CGGGCCTGTC GACCATCTCT TCGCACTGCC GATCCTCGCC
GATTACATCG AGAGCAAGCT GGACACCTCG CGTATCACGG TGGTCGCACC GGACGCCGGG
CGGGTGCGGG TCGCGGAACG GTGGACCGAT CGGCTGAACT GTCCCCTCGC CATCATTCAC
AAGCGGCGCG ATCCGCTGGT CGCCAACGAG GTGAAAATTC ACGAGGTGGT CGGCGCGGTC
GAGGGGCGCA TCTGCGTCAT CGTCGATGAC ATGATCGACA CAGCCGGAAC AATCACCAAA
GCGGCTGACG CATTGATGGA GAACGGTGCC GCCGACGTGG TGGCAACCGC AACCCACGCA
GTGCTCTCCG GTCCCGCCGT CGATCGGTTG AAGAATTCAC CGATCAGCGA AGTGGTGGTG
ACCAATACGC TGCCGGTGCC CTCGGAGCGG CGCATCGACA AACTCACGGT GCTGACCATC
GCGCCGATGC TGGCCCGAGC GATCCAGGAA GTCTTCGAGG ACGGCTCGGT GACCAGCCTC
TTCAATGGCG CAAGCTGA
 
Protein sequence
MTGIRRQGQK TLMLFSGRAH PELAAEVAAC LGIEPTPTSA YEFANGEIFV RFDESVRGSD 
AFVIQSHCAP INKWIMEQLI MVDALKRASA KRITVVVPFY GYARQDKKHR GREPISARLM
ADLFKAAGAD RLMAVDLHTA QIQGFFDGPV DHLFALPILA DYIESKLDTS RITVVAPDAG
RVRVAERWTD RLNCPLAIIH KRRDPLVANE VKIHEVVGAV EGRICVIVDD MIDTAGTITK
AADALMENGA ADVVATATHA VLSGPAVDRL KNSPISEVVV TNTLPVPSER RIDKLTVLTI
APMLARAIQE VFEDGSVTSL FNGAS