| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1888 |
|---|
| Symbol | |
|---|
| ID | 4486145 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 2134072 |
|---|
| End bp | 2135313 |
|---|
| Gene Length | 1242 bp |
|---|
| Protein Length | 413 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 70% |
|---|
| IMG OID | 639730678 |
|---|
| Product | threonine dehydratase |
|---|
| Protein accession | YP_873646 |
|---|
| Protein GI | 117929095 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1171] Threonine dehydratase |
|---|
| TIGRFAM ID | [TIGR01127] threonine dehydratase, medium form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 28 |
|---|
| Fosmid unclonability p-value | 0.795284 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCCGGCA CGCCCGACGA CTCCATTGCG CCCTGGATCA CCGCTACTCC CACGGAGTGG
TTGGAGAACG CCCGGGCGGC CGGCACGCTG CTGGACGGCG TTGCCCGCCG CACCCCGATT
GAGCTGTCCC GACGGGCGTT GATCGGCTCG CCGACTGCCC TGAAGTGCGA GAACATGCAG
TGCGGCGGTT CGTTCAAAAT CCGGGGCGCG TACGTGCGCA TTGCGCGGAT GCCGCCTGAC
CAGCGGGATC GCGGCGTCGT GGCCGCGAGC GCCGGGAATC ACGCGCAGGG GGTCGCCTTG
GCGGCCGGTC TACTCGGTAC CCGCGCCACC GTCTTCATGC CGCGCGACGC GTCCCTGCCG
AAAGTGGCGG CGACCCGCGG TTACGGCGCC GACGTGCGAC TTGTCGGGCA TTCCGTCGAT
GAGGCGCTCG TCGCGGCGCA GGAGTACGCC GCACAGACGG GAGCCGCCTT CATCCACCCG
TTCGACCACC CCGACGTGAT TGCGGGTCAG GCGACGGTCG GCATCGAAAT TCTCGAGCAA
TACCCCGACG TCCGCACGAT CGTGGTCAGT GCCGGCGGAG GCGGCCTTGC CGCAGGCATT
GCCGTCGTGG TCAGAGCACT TCGGCCGGAT GTGCGGGTGG TCGCGGTGCA GGCCCAACAG
GCCGCGGCCC TCGCCGCCTC GGTCCGCGCC GGGCATCCGA TAGCGCTTTC CGACGCCTCG
ACGATGGCCG ACGGCATCGC GGTCCGACGT CCCGGCTCGC TCACCCTGCC GCTGGTCAGC
CGGTACGTCG ACGAGATCCG CACGGTGAGC GAAGAGGCCA TTGCGCATGC CGTGTTGGCC
TGTTTGGAGC GGGCCAAACT CGTCGTTGAA CCGGCGGGGG CGGCAGCGTT GGCTGCGGTG
ATGGATGATT CCAGCGCCTT TCCATCGCCG GTGGTTGCCG TCCTCTCCGG CGGGAACGTC
GATCCGATCG TTCTGCTTCG CATCCTGCGC CATGGGTTGG CGGCGGCCGG CCGCTACCTG
ACCTTTCACG TCACGTTGCC CGATCGTCCC GGCGCGCTCG CCGCTCTGCT CACGGCCCTT
GCCGCGGTTG AGGCGAACGT GCTGGACGTC GTCCACGAGC GGACGCAGGC CGCGCTCGCT
GTCGACGAGG TGGAGGTCGC GCTGCAGGTG GAGACTCGCG GTCAGGAGCA CTCGCAGGAG
GTGCTCGAGA CCGTTGCGCG GCTGGGGTAC GCCGTGTCTT GA
|
|---|
| Protein sequence | MAGTPDDSIA PWITATPTEW LENARAAGTL LDGVARRTPI ELSRRALIGS PTALKCENMQ
CGGSFKIRGA YVRIARMPPD QRDRGVVAAS AGNHAQGVAL AAGLLGTRAT VFMPRDASLP
KVAATRGYGA DVRLVGHSVD EALVAAQEYA AQTGAAFIHP FDHPDVIAGQ ATVGIEILEQ
YPDVRTIVVS AGGGGLAAGI AVVVRALRPD VRVVAVQAQQ AAALAASVRA GHPIALSDAS
TMADGIAVRR PGSLTLPLVS RYVDEIRTVS EEAIAHAVLA CLERAKLVVE PAGAAALAAV
MDDSSAFPSP VVAVLSGGNV DPIVLLRILR HGLAAAGRYL TFHVTLPDRP GALAALLTAL
AAVEANVLDV VHERTQAALA VDEVEVALQV ETRGQEHSQE VLETVARLGY AVS
|
|---|
| |