Gene Acel_1820 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1820 
Symbol 
ID4486291 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp2062006 
End bp2063040 
Gene Length1035 bp 
Protein Length344 aa 
Translation table11 
GC content66% 
IMG OID639730610 
Product6-phosphogluconate dehydrogenase-like protein 
Protein accessionYP_873578 
Protein GI117929027 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1023] Predicted 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.142363 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGTCCA ACGAGGTGCG GGAACTCGGC ATCGTCGGTC TTGGCCGGAT GGGCGCGAAT 
ATCGCCCGGC GGGTGATGCG CGCCGGGCAC CGTTGCGTTG TGTACGACGT CCGCGAGGAT
GCGGTCCGGG CGGTTGCCGA GGAGGGCGCT GCGCCTGCGG CGTCGCTTGC CGAGCTGGTG
GAGAAACTCA GTCCACCACG GGCGGTCTGG GTGATGCTCC CGGCGGGCGA GGTGACCGGA
GAAGCGATCG ACGCGCTCGG CGAGCTGCTG TTGGCGGACG ACACCATCAT TGACGGCGGC
AACAGTTATT ACCGGGACGA CGTTCGACGC GCGGCCGCGC TTGCGCCGCG TGGGATTCAC
TTCGTCGATT GCGGCACCAG CGGTGGCGTC TGGGGTCTGG AGCGAGGGTA CTGCTTGATG
ATCGGTGGTG AAGCCGAGGT CGTCTCGCGG TTGCGCCCGA TCTTTGCCGC GCTCGCTCCG
GGGGTGTCGG CCGCGCCGCG GACACCGGCC CGTAGCGGGA CGCCGTCTGA TGCGGAGCAC
GGCTTTCTGC ACTGCGGCCC GGTGGGTGCA GGTCATTTCG TGAAGATGGT GCACAACGGC
ATCGAATACG GCATGATGGC CGCGCTCGCT GAAGGATTGA ATATTCTGCA CAGCGCGGAC
ATTGGAAAGC ATCACGTCGC GACGGACGCG GAAACTGCGC CGATTGAATT CCCGGAATTC
TACCGGTACG AGTTTGACGT AGCGGAGGTC GCTGAAGTCT GGCGGCGAGG CAGCGTCATT
CAGTCGTGGT TGCTGGACCT GACCGCGGAC GCCCTCGCGC GATCCCCGGA GCTTGCCGAA
TTCGGCGGGC GTGTCTCGGA TTCCGGGGAG GGCAGGTGGA CGGCGATCGC GGCGGTCGAG
GAAGGCGTCC CGGCGCCGGT TCTCACGACG GCTCTCTATT CCCGGTTCGC ATCGCGCGGG
TTGGACGATT TCGCCAACAA GATTCTGTCG GCGATGCGCA AGGGTTTCGG CGGACATGAG
GAGAAGCCGG GCTGA
 
Protein sequence
MTSNEVRELG IVGLGRMGAN IARRVMRAGH RCVVYDVRED AVRAVAEEGA APAASLAELV 
EKLSPPRAVW VMLPAGEVTG EAIDALGELL LADDTIIDGG NSYYRDDVRR AAALAPRGIH
FVDCGTSGGV WGLERGYCLM IGGEAEVVSR LRPIFAALAP GVSAAPRTPA RSGTPSDAEH
GFLHCGPVGA GHFVKMVHNG IEYGMMAALA EGLNILHSAD IGKHHVATDA ETAPIEFPEF
YRYEFDVAEV AEVWRRGSVI QSWLLDLTAD ALARSPELAE FGGRVSDSGE GRWTAIAAVE
EGVPAPVLTT ALYSRFASRG LDDFANKILS AMRKGFGGHE EKPG