| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1713 |
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| Symbol | |
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| ID | 4484868 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidothermus cellulolyticus 11B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008578 |
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| Strand | - |
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| Start bp | 1926392 |
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| End bp | 1927633 |
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| Gene Length | 1242 bp |
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| Protein Length | 413 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 639730503 |
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| Product | RNA polymerase, sigma 28 subunit |
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| Protein accession | YP_873471 |
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| Protein GI | 117928920 |
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| COG category | [K] Transcription |
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| COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.229542 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 0.0793228 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCGGGAA CTGACGCGCC GGCGGATGTC GTGCGTACCG ACGCGGCGGT GTCATTGCCG
GCTGAACCGC GGGAGGCGGC GGTTTCGCAG CTTGATCACG AGGTGGCGGA GGAGGAGCCG
GTCCGGACCG CGCGCCGGAC CCGCGGATCG CGATCACGGA GTTCGCGTCG TGCAGCCGAC
GAGGAGCTGG TCGTCGACGT CGTGGAGGAC GACGCTCCCG CCGAGATTCC TACCGAAGAG
GAGCTGCTCG ACGCAGTCAG CCGTCCCGCC GGTTTCGACG ACGAGAGTGA CGATCTCGTA
GAGGACGATC TCGACCTGGA CGACGCCGGG TTGTCGCACG ACCCGGTGCG CAACTACCTC
AATGAGATCG GCCGTACTCC GCTCCTCGAC GCCGCGCAGG AAGTCGAGTT GGCCAAGCGG
ATCGAAGCCG GTGTGTACGC CGACGTCAAA CTCAACGACC CGACTCTGCA GTTGACGGAG
GAGGAGCGGC GCGACCTGGA GGCGATCCGC GATGACGGGG CCCGCGCCAA GGCGCACATG
CTCGAGGCGA ATCTCCGGCT CGTGGTCTCG GTTGCCAAGC GGTACTCGAA CCGGGGCATG
GCGTTCCTCG ACGTCATTCA GGAGGGCAAT CTCGGGCTCA TCCGCGCAGT GGAGAAATTC
GACTACACCA AGGGGTACAA ATTCTCCACC TACGCGATGT GGTGGATCCG GCAGGCCATC
ACGCGCGCCC TCGCGGATCA AGCTCGCACC ATCCGGTTGC CGGTGCACGT CGTCGAGCAA
CTCAACAAGC TGACCCGGCT CCAGCGCGAG CTGCACCAGC AATTCGGCCG GGAACCCACG
GCTGAGGAAC TTGCCGCCGA GCTTGACCGA ACGCCGGAGC AGATCGAGGA GATGCTGCGG
AACGCCCGCC AGCCGGTCAG CCTGGACAAC CCGGTTGGCG ACGACGAGGA CACCCTGCTG
GGCGATCTCA TCGAGGACAT GGAGGCGCCC GCCGCCTCGG ACGCCCTCGA ATACCAGGCG
ATGATCGACA CCGTGCATCG TGCACTGGCC GGGCTGGACC CGCGAGAGGC CCGGGTGATT
GCGCTGCGCT TCGGCCTGGT CGGCGGCCGG CCGCACACGC TGGACGAAAT CGGCCGGGAC
GTCGGCCTGA CCCGGGAGCG GGTGCGGCAA ATCGAGCGCG AGGCCTTAGC GAAACTGCGC
GACCCCAACA GCCCCGACTC CCTGCTCGAC TGGGCCAGCT GA
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| Protein sequence | MPGTDAPADV VRTDAAVSLP AEPREAAVSQ LDHEVAEEEP VRTARRTRGS RSRSSRRAAD
EELVVDVVED DAPAEIPTEE ELLDAVSRPA GFDDESDDLV EDDLDLDDAG LSHDPVRNYL
NEIGRTPLLD AAQEVELAKR IEAGVYADVK LNDPTLQLTE EERRDLEAIR DDGARAKAHM
LEANLRLVVS VAKRYSNRGM AFLDVIQEGN LGLIRAVEKF DYTKGYKFST YAMWWIRQAI
TRALADQART IRLPVHVVEQ LNKLTRLQRE LHQQFGREPT AEELAAELDR TPEQIEEMLR
NARQPVSLDN PVGDDEDTLL GDLIEDMEAP AASDALEYQA MIDTVHRALA GLDPREARVI
ALRFGLVGGR PHTLDEIGRD VGLTRERVRQ IEREALAKLR DPNSPDSLLD WAS
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