Gene Acel_1706 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1706 
Symbol 
ID4484706 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1919420 
End bp1920685 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content70% 
IMG OID639730496 
Producthypothetical protein 
Protein accessionYP_873464 
Protein GI117928913 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0769] UDP-N-acetylmuramyl tripeptide synthase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0418667 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.00728652 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGCCG CACTCCGGCT TCGTACCGCC GTCCGGTTGG GCCGGCTCGC TGGGGTGCTC 
TCGCGCGCGC TGCGGCGGGG CGACGGCATG GTCATCAGCG GGCGGGTGGC ACTCGCCGCC
TGCCCGGACG CGTTTCGGCA GCTCACAGCG GTCCGTCCGG TGACCTTCGT TTCTGCGACC
AACGGCAAGA CAACCACGAC CCGACTGCTC GCCGCCGCCC TCCGGACGGC CGGCCCGGTG
GTGACCAATC TGTCCGGCGC GAACATGCCA CCCGGGCTGA TCGCCGCGCT CCTCACCGCC
CCCGACGCGA GCACACCAGC GGTGTTCGAG GCAGACGAAA CCTACCTGCC CACCCTGCTC
GACCAGGCAC CGCGGCGTAC CACCCTCGTT CTCGGCAATC TCACCCGCGA CCAGCTCGAT
CGCGTCGGTG AGGTCGCGAT GGTGGCGCGG CGCTGGCGGA AAGCCTTCGC CGCGCATCCC
GAGCTGACCG TCGTGGCAAA TGCCGACGAT CCGCACGTCG TCTGGGCCGC CTCCGTTGTC
CCAACGGTTA CCTGGGTTGC CGTTGGGCAG CCGTGGCGAG CCGATGCCGC CGTCTGTCCC
GGATGCGGTG CGGTGCTGCA GTGGGCGGAC GACGTGTGGT CGTGCTCGTG CGGACTGCGG
CGCCCCGAGC CCACCTGGTC GCTGGACGGC GATCATCTTC TCCACGGCGA TCTTCGGTTG
CCATTGACGC TTGCACTGCC CGGACGGGCG AATCGGGCGA ATGCTGCGGT GGCTGCGGCA
GCCGCCGATC TTGCCGGCAT TCCGCCAGCC CAAGCGGTCG CGGCGTTTGC GAGCGTGGCA
TCCGTGGGCG GCCGCTACGA AGTGCGCGAG TACGCCGGCC GCCGGATCCG TCTGCTGCTC
GGCAAGAATC CAGCGGGCTG GACGGAAATC TTCGATGTGC TCGCACCTCC GCCGGCTCCG
GTGGTCATTG CGATAAATGC GCGGGCGGCC GACGGTCGCG ATCCATCCTG GTTGTGGGAC
GTCCCGTTTG AACGGCTCGC CGGCCGATTC GTTGTCGCGA CCGGAGAACG GCGGTACGAC
CTCGCCGTCC GATTGCTCTA CGCGGGTGTT TCGCACACCA CGGTGGAGAA TCCGGGCGAG
GCCTGGCCGC CCGAGATCGG CACTGCCGGG CTGGACGACG CACCGCCGCT CGATGTCGTC
GCGACCTACA CCGCGTTCCG GGATTGGCTT CGGCGCACCG GCGGAGACAC CGATGTCCGC
GGCTGA
 
Protein sequence
MSAALRLRTA VRLGRLAGVL SRALRRGDGM VISGRVALAA CPDAFRQLTA VRPVTFVSAT 
NGKTTTTRLL AAALRTAGPV VTNLSGANMP PGLIAALLTA PDASTPAVFE ADETYLPTLL
DQAPRRTTLV LGNLTRDQLD RVGEVAMVAR RWRKAFAAHP ELTVVANADD PHVVWAASVV
PTVTWVAVGQ PWRADAAVCP GCGAVLQWAD DVWSCSCGLR RPEPTWSLDG DHLLHGDLRL
PLTLALPGRA NRANAAVAAA AADLAGIPPA QAVAAFASVA SVGGRYEVRE YAGRRIRLLL
GKNPAGWTEI FDVLAPPPAP VVIAINARAA DGRDPSWLWD VPFERLAGRF VVATGERRYD
LAVRLLYAGV SHTTVENPGE AWPPEIGTAG LDDAPPLDVV ATYTAFRDWL RRTGGDTDVR
G