Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1657 |
Symbol | |
ID | 4486712 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 1863750 |
End bp | 1864670 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639730446 |
Product | 2,3-dimethylmalate lyase |
Protein accession | YP_873415 |
Protein GI | 117928864 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2513] PEP phosphonomutase and related enzymes |
TIGRFAM ID | [TIGR02317] methylisocitrate lyase |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.106264 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.68628 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGACACCGA CGTCCGCGGC CGCCGATTTC CGGGCGAAGC TCACGAGCGG CCGCTTGCTC CGATTCCCCG GCGCCATCAA TCCGCTGTCC GCGGTCCTCA TTGAGGAGCT GCGATTTGAC GGGGTGTACG TCTCAGGCGC CGTCGTCGCT GCGGATTTGG CCCTGCCGGA CATCGGCCTG ACGACGCTGA CCGAAGTCGT GAATCGAGCC GAGCAGATCG CCCGGGTGAC ACGCCTCCCG GTGCTCGTTG ACGCCGACAC CGGTTTCGGC GGTCCGGTGA ACATCGCCCG GACCGTCCAG CTGCTCACCC GCGCGGGTGT CGCCGGTTGT CACATCGAAG ACCAGCAACA CCCGAAACGC TGCGGCCACC TGGAGGGCAA GACACTTGTC ACCGTAACGG AAATGCTCCA GCGCATCCGC GCGGCCGTGA CCGCGCGTCC CGACCCCGAC TTCGTCATTT GTGCGCGCAC CGATGCCCGC ACCGTCGAGG GGCTCGATGC CGCGATCGAT CGGGCGAAGG CATATGTTGA CGCGGGAGCC GACCTCATCT TCGCGGAAGC CCTCGCGGAC GAAGCGGAAA TCGCCCGGTT TCGGGCGGCG GTCGACGCGC CGCTTCTCAT CAACATGACG GAATTCGGCC GCACCACCCT GCTCCCCGCC TCCACTCTGG CCACTCTTGG TGTCAATGTC GTCATCTACC CGGTGACACT CTTCCGGGTC GCGATGGGAG CCGTGGAACG CGCGCTCGCC ACGATCGCGG CGGAAGGAAC GCAGATGTCG TTGCTGGAGG GCATGCAGAC CCGGCAGCGG CTGTACGAAT TGGTCCGTTA CCGCGACTAT GCCGCTTTTG ACGCCGACAT TTACACGTTT ACGACGCCAA CCACCACCCC GACGGCGGAG AGCGATTCCG ATGACCAGTG A
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Protein sequence | MTPTSAAADF RAKLTSGRLL RFPGAINPLS AVLIEELRFD GVYVSGAVVA ADLALPDIGL TTLTEVVNRA EQIARVTRLP VLVDADTGFG GPVNIARTVQ LLTRAGVAGC HIEDQQHPKR CGHLEGKTLV TVTEMLQRIR AAVTARPDPD FVICARTDAR TVEGLDAAID RAKAYVDAGA DLIFAEALAD EAEIARFRAA VDAPLLINMT EFGRTTLLPA STLATLGVNV VIYPVTLFRV AMGAVERALA TIAAEGTQMS LLEGMQTRQR LYELVRYRDY AAFDADIYTF TTPTTTPTAE SDSDDQ
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