Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1574 |
Symbol | rnc |
ID | 4485474 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 1775188 |
End bp | 1775928 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 639730358 |
Product | ribonuclease III |
Protein accession | YP_873332 |
Protein GI | 117928781 |
COG category | [K] Transcription |
COG ID | [COG0571] dsRNA-specific ribonuclease |
TIGRFAM ID | [TIGR02191] ribonuclease III, bacterial |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 0.0764716 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCGAAGC GCTCCGTGGC GGCGGAGACG AACGGCGCGG CTGCTCTTGA GGAACTTCAG CAGATCGCCG GGTTGCCTTT GAGCCTGGCT CTGCTCGAAC GCGCCGTGAC CCATCGCTCC TATGCCTACG AGAACGGCGG ATTGCCCACC AACGAGCGAC TGGAATTTCT CGGCGACGCC GTTCTCGGGC TTGTCATCAC CGACACGCTG TACCGCCGGT TCCCTGAGCT TCCGGAAGGC CAGCTGGCGA AATTCCGGTC CGCTGTGGTG AACATGCGGG CCTTGGCCGA GGTGGCCCGC TCGCTTCGCC TCGGCGAATT CCTCCGGCTG GGTCGCGGTG AGGAGTCAAC GGGCGGGCGC AACAAGTCGT CCATCCTCGC CGACGCGCTG GAAGCGCTGA TCGGAGCGGT GTACGTCGAG CACGGGCTGG ACGGCGCCGC GGAATTCGTC CATCGCCTTT TCGATCCCCT GATTGACCGG GCGGCCGCCC TCGGCGCCGG CCTGGATTGG AAGACCTCGT TGCAGGAGCT GACGGCGGCG CAGCACCTCG GCGTCCCGTT CTACGACTTG TCCGAACGCG GCCCCGACCA CGAGAAAGTC TTTACCGCCG AGGTGCGGAT CGGCGGCCGG GTGTACGGCA CGGGCAGCGG ACACTCCAAG AAGGAAGCCG AACAACGCGC CGCCCAGGAG GCCTGGTTGC GGATTCGCCG CTCGGTCGAC GGCGCCGACG CGATGTCCTG A
|
Protein sequence | MAKRSVAAET NGAAALEELQ QIAGLPLSLA LLERAVTHRS YAYENGGLPT NERLEFLGDA VLGLVITDTL YRRFPELPEG QLAKFRSAVV NMRALAEVAR SLRLGEFLRL GRGEESTGGR NKSSILADAL EALIGAVYVE HGLDGAAEFV HRLFDPLIDR AAALGAGLDW KTSLQELTAA QHLGVPFYDL SERGPDHEKV FTAEVRIGGR VYGTGSGHSK KEAEQRAAQE AWLRIRRSVD GADAMS
|
| |