Gene Acel_1562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1562 
Symbol 
ID4485358 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1759326 
End bp1760414 
Gene Length1089 bp 
Protein Length362 aa 
Translation table11 
GC content71% 
IMG OID639730346 
Productamidohydrolase 3 
Protein accessionYP_873320 
Protein GI117928769 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1228] Imidazolonepropionase and related amidohydrolases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.345787 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.0640888 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGACCGCAT ATCACCTGCG GGTGACCGTC CTGCCCGGTG GTGACGTGCG TGACCTCTAT 
GTCGTCGACG GCCGATTCAC CTTCACCCGG CCCTCCCATC TCGACGTCAC CACCATCGCT
GACGGCGGTT ACGCCCTCCC GGGCTTGGTC GACGCGCACT GCCATGTCGG GCTGGACGCC
AACGGGCCGG TTGACCTGGC GACCAGCCGG GCCCAGGCGG TTGCGGATCG AGACCGAGGG
GCTCTTCTCC TCCGGGACGC CGGCTCGCCG GTCCGGTACG CCGAACTGGA CGACGATCCC
ACCCTGCCGC GGATCATCCA TGCCGGCCGG CACATCGCCC GAACCCGCCG CTATCTCAAG
GGGTACGCCG TCGAGGTGGA GCCGGAGCAG CTCGTCGCCA CCGTCGAAGC CCAAGCGCAG
CGCGGGGGCG GCCACGGGCC CGGCTGGGTG AAGATCGTCG TCGATTGGAT CGACCGCAGT
GTCGGCGATT TGGCGCCGTG TTGGCCCGCG GACGTGTTGG CCGCTGCGGT GCGCCGGGCG
CATGAGTTGG GCGCGCGGGT TGCGGTGCAC GCGTTCGGGG AGGAGGTTCT CCCGGACGTC
GTTGCCGCCG GCGTCGACTC CATCGAACAC GGCACCGGCC TGACCGCTGA GGTGATCGAC
GAGGTGGCAC GCCGTCCGAT CGCCGTCGTC CCCACCCTCG TCAACATCGC CACCTTCGAT
GCGATCGCTG ACCGGGCAAC GAAGTACCCG GTGTACGCCG CACGGATGCG CGCGCTGAAA
CGGTCGGCCG CCGAGCGGCT CCGGGCCGCC CGGGACGCCG GAATCCCGCT GTACGTCGGC
ACCGACGCTG GGGGCGTGCT CCCGCACGGT CTCGTTGTTG ACGAGATGCT CGCCCTTCGC
GAGATCGGGC TCACCACCCA GGAGGTCCTG GCGGCGGGTT CGTGGGCTGC CCGCGAGTGG
CTGGGTCTGC CCGGCGTCGT TGAGGGCGGC CCGGCCGACC TGGTCGTGTA CGAGGACGAT
CCACGCCGGG ACCTGGGCGT CCTGCGATAC CCGCGGCGGA TCGTCGTCCG TGGCACCCTC
ATCCGCTGA
 
Protein sequence
MTAYHLRVTV LPGGDVRDLY VVDGRFTFTR PSHLDVTTIA DGGYALPGLV DAHCHVGLDA 
NGPVDLATSR AQAVADRDRG ALLLRDAGSP VRYAELDDDP TLPRIIHAGR HIARTRRYLK
GYAVEVEPEQ LVATVEAQAQ RGGGHGPGWV KIVVDWIDRS VGDLAPCWPA DVLAAAVRRA
HELGARVAVH AFGEEVLPDV VAAGVDSIEH GTGLTAEVID EVARRPIAVV PTLVNIATFD
AIADRATKYP VYAARMRALK RSAAERLRAA RDAGIPLYVG TDAGGVLPHG LVVDEMLALR
EIGLTTQEVL AAGSWAAREW LGLPGVVEGG PADLVVYEDD PRRDLGVLRY PRRIVVRGTL
IR