Gene Acel_1560 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1560 
Symbol 
ID4485356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1758407 
End bp1758697 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content75% 
IMG OID639730344 
ProductRNA-binding protein 
Protein accessionYP_873318 
Protein GI117928767 
COG category[R] General function prediction only 
COG ID[COG1837] Predicted RNA-binding protein (contains KH domain) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.0831203 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCACCCC GTCCGCGTAG CCAGCCGCGC GCCGCGTCGC CCGTCGCGCC GGAGGTTCTC 
GAGCAGGCGT TGGCCCACCT TGTCCGCGGG ATCGTCGCTC ATCCGGATGC CGTCGACGTC
CACGGACGGC CTGGCCGTCG CGGCCCGACA CTCGAGGTGC ACGTGCACCC AGACGACCTC
GGCAAGGTGA TCGGCCGGGC CGGCCGGACC GCCCGTGCGC TGCGGACCGT GATGGCGGCG
TTGGGTGGTC CCGGCGCGCG GGTTGAGGTC GTGGACGCCG GGGACGAGTG A
 
Protein sequence
MPPRPRSQPR AASPVAPEVL EQALAHLVRG IVAHPDAVDV HGRPGRRGPT LEVHVHPDDL 
GKVIGRAGRT ARALRTVMAA LGGPGARVEV VDAGDE