Gene Acel_1458 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1458 
Symbol 
ID4484903 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1629666 
End bp1631048 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content62% 
IMG OID639730242 
Productglycosyl hydrolase family chitinase 
Protein accessionYP_873216 
Protein GI117928665 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3469] Chitinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGTCCTTCA GCGTAGATTC CGGTCTTTCG TCTGCGCTCG GCGGGTACTC AGACGCTGAT 
CTCATCTCAG ACATCAACTA TCTGCACAGC ATAGGCAAAC ACGTCATTAT CTCGGTCGGC
GGACAGAACG GCACCATTAG TGTCTCCGAT TCGACTAGCG CGTCCAACTT TGCGAACAGC
GTTTATCAAC TGATGCGTCA ATATGGCTTC GATGGCGTGG ATATCGACCT TGAAAATGGC
ATAAATGCAA CCTACATGAC TCAAGCATTG CGTCAGCTGG CGTCGCTCGC TCGGCCGAGT
CTCATCATCA CGATGGCTCC CCAGACGATT GATATGCAGT CAACCGGCAT GGCGTATTTC
CAGCTGGCCT TGAATATCAA AGACATTCTC ACGATCGTCA ACACGCAGTA CTACAACTCC
GGATCGATGA ACGGCTGCGA CGGCAAGGTG TACGCACAGG GGAGCGAGGA CTTCCTGACG
GCGCTCGCGT GCATCCAACT GCAGGGCGGT CTCCGACCGG ACCAAGTAGG ACTCGGATTG
CCTGCAACGA CGTCCGCGGC TGGGGGCGGA TATGTGTCTC CCACGGTCGT GAACAACGCG
CTGGACTGCC TGTCGAGCGG GACGAACTGT GGGACGTTCC ATCCCTCGAC AACCTGGCCG
GGCATTCGTG GAGCGATGAC GTGGTCGATT AACTGGGATG CGACAAACGG ATATGCATTT
GCCAACACCG TTGCGTCGCA CCTCAAGACC CTCCCGACAG GTTCGCCGTC CCCAAGCCCA
AGCCCGTCCC TGTCGCCGTC GCCAAGCCCG TCCCCAAGCC CAAGCCCGTC TCCGTCCCCG
TCTCCGTCCC TGTCTCCGTC GCCGTCTCCG TCGCCAAGCC CGTCTCCAAG CCCGAGTCCG
TCTCCGTCTC CGTCTCCGTC GCCAAGCCCG TCTGCGTCGC CAAGCCCGTC TGCGTCGCCA
AGTCCGTCGC CGTCGGCGAG TCCGTCGGCG GGGTTGGCGG TGAATGGGGG GTTTGAGACC
GGTGATGTGT CGGGGTGGAG TTGTCAGGCG CCGGATGCGG TGGTCGGATC GCCGGTGCAT
TCCGGCCGGT ATGCGTTGGC GGGGGTGCCG ACCGGTTCGA CGACCGGCCA GTGCACCCAG
ACGGTGAGTG TGGCGCCGAA TACCACCTAC ACGGTGTCGG CGTGGGTGAA CGGGTCGTAC
GTGTACCTGG GGGCTAATGG GGCCAGTGGG GATGTCAACA CCTGGACCCC GGGGACCGGT
GGGGCCTACC AGCAGCTGAC CATCCGGGTC ACCACCGGAC CCACCCAGAC CACCATGACC
GTCTACATCC ACGGCTGGTA CGCCCAACCC ACCTACTACG CCGACGACAT CACCCTCACC
TAA
 
Protein sequence
MSFSVDSGLS SALGGYSDAD LISDINYLHS IGKHVIISVG GQNGTISVSD STSASNFANS 
VYQLMRQYGF DGVDIDLENG INATYMTQAL RQLASLARPS LIITMAPQTI DMQSTGMAYF
QLALNIKDIL TIVNTQYYNS GSMNGCDGKV YAQGSEDFLT ALACIQLQGG LRPDQVGLGL
PATTSAAGGG YVSPTVVNNA LDCLSSGTNC GTFHPSTTWP GIRGAMTWSI NWDATNGYAF
ANTVASHLKT LPTGSPSPSP SPSLSPSPSP SPSPSPSPSP SPSLSPSPSP SPSPSPSPSP
SPSPSPSPSP SASPSPSASP SPSPSASPSA GLAVNGGFET GDVSGWSCQA PDAVVGSPVH
SGRYALAGVP TGSTTGQCTQ TVSVAPNTTY TVSAWVNGSY VYLGANGASG DVNTWTPGTG
GAYQQLTIRV TTGPTQTTMT VYIHGWYAQP TYYADDITLT