Gene Acel_1452 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1452 
Symbol 
ID4485089 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1622258 
End bp1623490 
Gene Length1233 bp 
Protein Length410 aa 
Translation table11 
GC content63% 
IMG OID639730236 
Producthypothetical protein 
Protein accessionYP_873210 
Protein GI117928659 
COG category[V] Defense mechanisms 
COG ID[COG0577] ABC-type antimicrobial peptide transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCCGCC TCGAGCACAT TCGTATCGCC GTTGCGGGCA TCGGGCATAA CATGCTCCGC 
TCTGCGCTCA CGATGCTGGG CATTCTCATC GGGGTCGCCT CGGTCATCAT TCTCGTCGCC
GTCGGCACCG GCTCATCGGC GACGATCCGG CGCACGATCG AAGGTCTCGG TACCAACCTG
CTGCAAATCA ACCGGCAATT CGCGTTCGGC GCGTTCGGCA GAGCGAGCGC CGGAACACTC
TCCCGGGCGC CCAGTTTGAC CGCAGCCGAC GTCGCCGCGC TCTCCGACAG GAACCAGAAT
CCCGATATCG TCGCCGTCGC CCCGGTCGTC AACGTTCCAA ACGTAACCGC GGTGTACCAA
GGCGTGTCCT ATGCGCCGTC CTCATTCGTC GGCACCACGC CGAGCTACCA GCAAATCAAG
GACTATCAGG TGGCGGAGGG CAGCTTCTTC ACCGCAGCGG ACGAATCACA ACACGACAGA
GTCGCCGTCA TCGGCCAGAC CGTCGCAACG AACCTCTTCG GGAACGCCGA CCCGGTCGGC
AGCAATGTCC AGTTCAACGG GGTCACCTTC CAGATCATCG GACTGCTGGC GGTGAAAGGC
ACGAACGGCG CCCAGGATCA AGACGACGTC GTCATCGCAC CGCTCACGGC CGTACAGGAC
ACGCTGACCG GTTACTCCTC GTCGTATTCA AGCATCGTCG TGGAAGCTGC TTCCCCGGAG
CGACAAGCGG CCGCGCAAGC GGAAATCACC GCAACGCTTG AGTCCACGCA CCATATCGCC
CCGGGCGGCA CCGATGACTT CCGAATTCTC AACCAGGCAA GCCTGCTGCA GACGACCCAG
TCGTCAAGCC GCGTGTTCAC GTCGCTGCTC GGCGCGGTGG CGGCGATCAG CCTCCTGGTC
GGCGGCATCG GCGTCATGAA CATCATGCTC GTCACCGTTG CGGAGCGGAC AAGAGAAATC
GGCATTCGCA AGGCGATCGG CGCCAAGCGA TCCGATATCA TGGCGCAGTT CGTCGTCGAA
TCCGTGCTGC TGTCGGCGTT CGGCGGCCTG CTCGGTGTCC TCGTCGGCGT CGGCGGAAGC
CGATTCACCA TCCTCGGTAT CCATCCGCAG GTGGCGACGT ACTCGATATT TCTCGCGTTC
GGTGTCGCGG TCGCGACCGG TTTGTTCTTC GGTCTGTATC CCGCGAGCCG GGCATCCCGA
CTGCTTCCCG TTGACGCCCT TCGTTACGAG TGA
 
Protein sequence
MIRLEHIRIA VAGIGHNMLR SALTMLGILI GVASVIILVA VGTGSSATIR RTIEGLGTNL 
LQINRQFAFG AFGRASAGTL SRAPSLTAAD VAALSDRNQN PDIVAVAPVV NVPNVTAVYQ
GVSYAPSSFV GTTPSYQQIK DYQVAEGSFF TAADESQHDR VAVIGQTVAT NLFGNADPVG
SNVQFNGVTF QIIGLLAVKG TNGAQDQDDV VIAPLTAVQD TLTGYSSSYS SIVVEAASPE
RQAAAQAEIT ATLESTHHIA PGGTDDFRIL NQASLLQTTQ SSSRVFTSLL GAVAAISLLV
GGIGVMNIML VTVAERTREI GIRKAIGAKR SDIMAQFVVE SVLLSAFGGL LGVLVGVGGS
RFTILGIHPQ VATYSIFLAF GVAVATGLFF GLYPASRASR LLPVDALRYE