Gene Acel_1399 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1399 
Symbol 
ID4486539 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1563254 
End bp1563955 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content68% 
IMG OID639730183 
ProductTrkA domain-containing protein 
Protein accessionYP_873157 
Protein GI117928606 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0569] K+ transport systems, NAD-binding component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGTAG CGATTGCCGG CGCGGGAGCT GTCGGCCGGT CCATCGCCGC GGAACTGGTG 
GAGAACGGCC ACGAAGTACT CCTCATCGAC AAGGACAGCA AGGCCATCGA CGTCGACGCC
ATCCCCCGCG CGGAGTGGAT GCTCGCCGAC GCGTGCGAAA TCGCCAGCCT CGACGAAGTC
GGACTCGACC GGTGCCATGT CGTGGTCGCC GCCACCGGCG ACGACAAGGT GAATCTGGTG
GTGTCACTGC TGGCGAAGAC GGAGTACGGC GTCCCCCGGG TGGTTGCGCG CGTCAACGAC
CCGGTCAATG AATGGCTCTT TGACGAGTCC TGGGGGGTGG ATGTCGCGGT GTCCACCCCG
CGTCTGCTCT CCGCACTGGT CGAGGAAGCC GTGAGCGTTG GAGATCTCGT ACGGCTCATG
ACCTTCCGCC GCGGCCAGGC GAACCTCGTC GAGTGGACCC TGCCGCCAAG CGCACCGTTG
ATCGGCAAGA GGGTCGGCTC CGTTTCGTGG CCGCCGGACA CCGCGCTCGT CGTCATCCTC
CGCGACGGAC GGGTCATCGT ACCCAGCCCG GACGATCCAC TCGAGGGCGG CGACGAGCTG
CTCTTCGTCG CCGCCCCGGA AGTGGAGGAA CAGCTCCGTG CCTTGCTGCT CCGTGGTTCG
CAGCCCCCGT CCGACCAGGC GGCCGCCGCC GGCGCACGGT AA
 
Protein sequence
MRVAIAGAGA VGRSIAAELV ENGHEVLLID KDSKAIDVDA IPRAEWMLAD ACEIASLDEV 
GLDRCHVVVA ATGDDKVNLV VSLLAKTEYG VPRVVARVND PVNEWLFDES WGVDVAVSTP
RLLSALVEEA VSVGDLVRLM TFRRGQANLV EWTLPPSAPL IGKRVGSVSW PPDTALVVIL
RDGRVIVPSP DDPLEGGDEL LFVAAPEVEE QLRALLLRGS QPPSDQAAAA GAR