Gene Acel_1376 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1376 
SymbolligC 
ID4485864 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1534459 
End bp1535541 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content68% 
IMG OID639730160 
ProductATP-dependent DNA ligase 
Protein accessionYP_873134 
Protein GI117928583 
COG category[L] Replication, recombination and repair 
COG ID[COG1793] ATP-dependent DNA ligase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.165882 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value0.400562 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAATCTTC CGGTCTCACC GCCGGTCGAG CCGATGCTCG CCCGCCTTGC CCCGAGCATT 
CCACCGGGCA TGCATTACGA ACCGAAATGG GACGGCTTTC GGTGCATCAT TTTCCGGGAC
GGCGACGAGG TGGTGTTCGG CAGCCGTACC GGCCGACCCC TGGAGCGATA TTTTCCCGAG
CTCGCGGACG GCGCACGCCG GGAATTGCCG GCCCGATGCG TCATTGACGG GGAAATCGTC
GTCCTGACCG ACGGCCGGGT CGATTTCGGC ACGCTGCAAC AACGCATCCA TCCGGCGGCT
TCCCGAATCC GGGCGCTCGC CGATGCCTCC CCCGCGGTCG TCGTCGTCTT CGACTTGCTC
GCGACAGCTG ATACGGCGAT GCTCACGCGG ACCTTTCATG AGCGGCGGGC CCGGCTCGTG
GAGCTCCTTG CCGGCAGCGG GTTTCCCTTC CTGCTCACTC CGGCCACTGA CGACCACGCC
CGGGCGGCGT ACTGGTTCGC CGCGCTGGAA GGCGCCGGCC TTGACGGCAT CGTCGCCAAA
CCCTTCGACC TGCGTTACCA GCCGGGGAAA CGGGTGATGG TGAAAATCAA ACACGAGCGA
ACCGCCGACT GCGTGGTCGC CGGCATGCGG CCGTATCGCG GCGGCAGTGG TGTCGGGTCG
CTCCTGCTCG GGCTGTATGA CGACGCCGGG GTCCTGCAGT ACGTGGGGGT CTGCGGCGCA
TTCGCCGCCT CCTCCCGGAC GGCACTCGCC ACGGAACTGT CGCCGCTGGT CACCGAGATC
ACCGATCACC CCTGGGGAGC AGGGCACGGC CGGGTACCGG GTACGCCGAA TCGATGGAAC
TCCGGAGAGA ACCTGGACTG GGTTCCGCTG CGGCCGGAGC GGGTCTGTGA GGTGGCCTAC
GACTTTCTGG ACGGCGCCCG GTTCCGTCAC ACCGCGCAGT TTCGGCGCTG GCGGCCGGAC
CGGACCCCGG AATCCTGCCG TTTCGACCAA TTCGAGGCGC CCGAACCGAT CGACCTCGCC
GCGGCCCTCG ATCTCCCGCC TGCAGACCGA TGCCGGCCGC GGCCCCAGCC GGCTGGGCCA
TAG
 
Protein sequence
MNLPVSPPVE PMLARLAPSI PPGMHYEPKW DGFRCIIFRD GDEVVFGSRT GRPLERYFPE 
LADGARRELP ARCVIDGEIV VLTDGRVDFG TLQQRIHPAA SRIRALADAS PAVVVVFDLL
ATADTAMLTR TFHERRARLV ELLAGSGFPF LLTPATDDHA RAAYWFAALE GAGLDGIVAK
PFDLRYQPGK RVMVKIKHER TADCVVAGMR PYRGGSGVGS LLLGLYDDAG VLQYVGVCGA
FAASSRTALA TELSPLVTEI TDHPWGAGHG RVPGTPNRWN SGENLDWVPL RPERVCEVAY
DFLDGARFRH TAQFRRWRPD RTPESCRFDQ FEAPEPIDLA AALDLPPADR CRPRPQPAGP