Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1376 |
Symbol | ligC |
ID | 4485864 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 1534459 |
End bp | 1535541 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 639730160 |
Product | ATP-dependent DNA ligase |
Protein accession | YP_873134 |
Protein GI | 117928583 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG1793] ATP-dependent DNA ligase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.165882 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 0.400562 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAATCTTC CGGTCTCACC GCCGGTCGAG CCGATGCTCG CCCGCCTTGC CCCGAGCATT CCACCGGGCA TGCATTACGA ACCGAAATGG GACGGCTTTC GGTGCATCAT TTTCCGGGAC GGCGACGAGG TGGTGTTCGG CAGCCGTACC GGCCGACCCC TGGAGCGATA TTTTCCCGAG CTCGCGGACG GCGCACGCCG GGAATTGCCG GCCCGATGCG TCATTGACGG GGAAATCGTC GTCCTGACCG ACGGCCGGGT CGATTTCGGC ACGCTGCAAC AACGCATCCA TCCGGCGGCT TCCCGAATCC GGGCGCTCGC CGATGCCTCC CCCGCGGTCG TCGTCGTCTT CGACTTGCTC GCGACAGCTG ATACGGCGAT GCTCACGCGG ACCTTTCATG AGCGGCGGGC CCGGCTCGTG GAGCTCCTTG CCGGCAGCGG GTTTCCCTTC CTGCTCACTC CGGCCACTGA CGACCACGCC CGGGCGGCGT ACTGGTTCGC CGCGCTGGAA GGCGCCGGCC TTGACGGCAT CGTCGCCAAA CCCTTCGACC TGCGTTACCA GCCGGGGAAA CGGGTGATGG TGAAAATCAA ACACGAGCGA ACCGCCGACT GCGTGGTCGC CGGCATGCGG CCGTATCGCG GCGGCAGTGG TGTCGGGTCG CTCCTGCTCG GGCTGTATGA CGACGCCGGG GTCCTGCAGT ACGTGGGGGT CTGCGGCGCA TTCGCCGCCT CCTCCCGGAC GGCACTCGCC ACGGAACTGT CGCCGCTGGT CACCGAGATC ACCGATCACC CCTGGGGAGC AGGGCACGGC CGGGTACCGG GTACGCCGAA TCGATGGAAC TCCGGAGAGA ACCTGGACTG GGTTCCGCTG CGGCCGGAGC GGGTCTGTGA GGTGGCCTAC GACTTTCTGG ACGGCGCCCG GTTCCGTCAC ACCGCGCAGT TTCGGCGCTG GCGGCCGGAC CGGACCCCGG AATCCTGCCG TTTCGACCAA TTCGAGGCGC CCGAACCGAT CGACCTCGCC GCGGCCCTCG ATCTCCCGCC TGCAGACCGA TGCCGGCCGC GGCCCCAGCC GGCTGGGCCA TAG
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Protein sequence | MNLPVSPPVE PMLARLAPSI PPGMHYEPKW DGFRCIIFRD GDEVVFGSRT GRPLERYFPE LADGARRELP ARCVIDGEIV VLTDGRVDFG TLQQRIHPAA SRIRALADAS PAVVVVFDLL ATADTAMLTR TFHERRARLV ELLAGSGFPF LLTPATDDHA RAAYWFAALE GAGLDGIVAK PFDLRYQPGK RVMVKIKHER TADCVVAGMR PYRGGSGVGS LLLGLYDDAG VLQYVGVCGA FAASSRTALA TELSPLVTEI TDHPWGAGHG RVPGTPNRWN SGENLDWVPL RPERVCEVAY DFLDGARFRH TAQFRRWRPD RTPESCRFDQ FEAPEPIDLA AALDLPPADR CRPRPQPAGP
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