Gene Acel_1361 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1361 
Symbol 
ID4486253 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1515910 
End bp1516857 
Gene Length948 bp 
Protein Length315 aa 
Translation table11 
GC content60% 
IMG OID639730141 
Productbinding-protein-dependent transport systems inner membrane component 
Protein accessionYP_873119 
Protein GI117928568 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1175] ABC-type sugar transport systems, permease components 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.193472 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.165724 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACCGTA CGATGATCCA AGCGGTCAAC ACCGCCACCG ATAGCGCCCC ACGGCGGGCC 
CTCACCACGA GGGCCCGCCA CCGGCCGTCA CATCTCGGCT GGCTTTTCCT CATTCCGGCG
CTCAGTGTGT ATGGAATCTT CGTCCTGTGG CCCATCCTTC AAACCATCCG TTACTCCTTC
TATTCATGGG ACGGCGTTGA CAAGCCGCAA TGGGCTGGGC TCCGCAACTT TCGGGCCGTA
TTCACCGATC CACAACTGAC GTCCACGCTC GTGCATGTCG CCGAGCTGAT TCTCTTCTTC
ACCGTCATCC CCGTCGGGCT CGGGCTCGTT CTCGCCGCCA TCATGCAACG GGTGACGTCA
AGAAGAGTGA CATCGGTTGC ACGCGCAGTC CTCATCTTGC CTCAGATCGT GCCGCTGGTA
GCGGCCGGCA TTGCGTGGAG CTGGGTCCTC TCGTCGTCCG GCGTGGTCAA CCAAGTGCTG
CAGGCAATCG GCCTTCGGCA CATCACCCGT GCCTGGCTCG GCGACTTCAC GACGGCGCTG
CCCTCGGTCG GGCTGATCGG CGCATGGGTC TTGCTCGGAC TCTGCACCGT CCTATTGTCC
GTGGGAATGG GGAAGATTGA CGCGAGTCTC TATGAAGCCG CCGTACTTGA CGGAGCCGGA
CGCATACGCG AGTTCTTCGC CGTCACACTT CCCAGCATGC GCAATGAGAT TGCCGTCTGC
GTCACGGTGA CGATGATTTC GGCACTCTCC GCGTTTGACA TCGTCTACAT CACCACGCAA
GGCGGACCAG GTAACGCGAC CATGGTCCCG GGCTTAAAGG TTTACCAATT GGCATTCTTC
AATCGGCAAG TCGGGCTTGC GTCTGCGTTG GCTCTCGTTC TGATGGTCAT CGTGATCCTC
TGCATTATGC CGGTGCAATC GCTGTCGCGA CGGAGTGGCG ACGAATGA
 
Protein sequence
MNRTMIQAVN TATDSAPRRA LTTRARHRPS HLGWLFLIPA LSVYGIFVLW PILQTIRYSF 
YSWDGVDKPQ WAGLRNFRAV FTDPQLTSTL VHVAELILFF TVIPVGLGLV LAAIMQRVTS
RRVTSVARAV LILPQIVPLV AAGIAWSWVL SSSGVVNQVL QAIGLRHITR AWLGDFTTAL
PSVGLIGAWV LLGLCTVLLS VGMGKIDASL YEAAVLDGAG RIREFFAVTL PSMRNEIAVC
VTVTMISALS AFDIVYITTQ GGPGNATMVP GLKVYQLAFF NRQVGLASAL ALVLMVIVIL
CIMPVQSLSR RSGDE