Gene Acel_1347 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1347 
Symbol 
ID4484772 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1500032 
End bp1500655 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content71% 
IMG OID639730127 
Productglutamine amidotransferase subunit PdxT 
Protein accessionYP_873105 
Protein GI117928554 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0311] Predicted glutamine amidotransferase involved in pyridoxine biosynthesis 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.20518 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.550615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCATCC CATCGAACCG GCCTCGGGTC GGCGTTCTCG CTTTGCAGGG CGACGTCCGC 
GAACACCTCG CCGCACTCGG CGACGCCGGA GCGGACGCCG TGCCGGTGCG GCGTGCCGAC
GAGCTCGCGA CGGTCGACGC CCTCGTCATC CCAGGCGGCG AATCCACCAC GATGGACAAA
CTCGCGCGGG CGTTCGGCCT CTGGGAACCG CTGCGAGCCC GGCTGGCGGC AGGGATGCCG
GCTTTCGGCT CCTGCGCAGG GATGATCATG CTTGCGGCGC GGGTTGTCGA CGCCGCTCCC
GGCCAGGAGA CCCTCGGGGT CCTGGACATC ACCGTGCGAC GCAACGCCTT CGGCCGCCAA
GTCGACTCCT TCGAAGCCGA CATCCCGCTG ACCGGTCTGG ACGGCGGCCC GCTGCGCGCT
GTCTTCATCC GGGCGCCCTG GGTGGAGGAG ACCGGCCCGG ACGTCGAGGT CCTCGGGCGT
GTGCCGTCCG GCCGGCACGC GGGTAGGATC GTCGCCGTCC GGCAAGGCGC TGTGCTGGCC
ACCGCCTTCC ACCCGGAGCT CACTGCTGAT CGGCGGTTGC ACGCCTTCTT CGTCGCGATG
GTCGCTGCGC AGGCTCGGGT GTGA
 
Protein sequence
MTIPSNRPRV GVLALQGDVR EHLAALGDAG ADAVPVRRAD ELATVDALVI PGGESTTMDK 
LARAFGLWEP LRARLAAGMP AFGSCAGMIM LAARVVDAAP GQETLGVLDI TVRRNAFGRQ
VDSFEADIPL TGLDGGPLRA VFIRAPWVEE TGPDVEVLGR VPSGRHAGRI VAVRQGAVLA
TAFHPELTAD RRLHAFFVAM VAAQARV