| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_1338 |
|---|
| Symbol | |
|---|
| ID | 4484763 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidothermus cellulolyticus 11B |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008578 |
|---|
| Strand | - |
|---|
| Start bp | 1489923 |
|---|
| End bp | 1492385 |
|---|
| Gene Length | 2463 bp |
|---|
| Protein Length | 820 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 639730118 |
|---|
| Product | (p)ppGpp synthetase I, SpoT/RelA |
|---|
| Protein accession | YP_873096 |
|---|
| Protein GI | 117928545 |
|---|
| COG category | [K] Transcription
[T] Signal transduction mechanisms |
|---|
| COG ID | [COG0317] Guanosine polyphosphate pyrophosphohydrolases/synthetases |
|---|
| TIGRFAM ID | [TIGR00691] (p)ppGpp synthetase, RelA/SpoT family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 0.865833 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 0.439631 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGGAGCATC GAGCGAGCGT AGACGAGGCC GCCGGCGCGC TGGCCGGCTC CGACTACGAT
CAATCGCCTG ACAGCGCGCC GAACCGCGAC GAGCTGGCTG GATCACCAGC ACCGGGCGGC
TCGCCGGCGC CGGGCGGCTC CTCCGATGCG GCCGAGCGGG TGGACGACGT CGCCGCCACA
TCGCCGTCCG GCGGACGACG GGTGCGGAGC CGGCTGGCCC GGCTCGCGGC GCAACGCGGC
GGCACGATTC CCGTCCTCGA GCCGTTGATT CGCACGATCC GCGCGAGCCA CCCCAAGGCG
GATGTCCGCG ACGTCCAACG CGCCTATGAG GTCGCCGAGT TCTACCACCG CGGTCAACTG
CGCCGCAGCG GCGACCCGTA CATCACCCAT CCGCTCGCAG TCGCGACGAT TCTCGCGGAG
CTCGGCATGA CGCCGCCGAC CATCGTCGCC GCTCTGCTGC ACGACACGGT GGAGGACACC
ACCTACACCC TCGACCAACT CCGCCGCGAC TTCGGCGATG AGGTGGCCTC GCTCGTCGAC
GGGGTGACCA AGCTGGACCG GGTGAAATAC GGCGACGCGG CGACCGTGGA GACTGTCCGG
AAAATGGTGG TCGCGATGGC CCGCGACCCG CGTGTGCTCG TGCTGAAGCT CGCCGACCGG
TTGCACAACA TGCGCACGCT GCGGTACCTC CCGCCGGAGA AGCAGGAGCG CAAAGCCCGG
GAAACACTGG AAATCTACGC ACCGCTCGCA CACCGGCTGG GCATGAACAC CCTCAAGTGG
GAGCTGGAGG ACCTCTCGTT CGCCACGCTG TATCCCAAGC GGTACGAAGA AATCGCCCGG
CTCGTCGCGG AACGGGCGCC GAGCCGCGAC ACCTACCTGG CCAACGTCAT TGAGCAGGTC
AGCGCGCAGC TGCGCGCCGC GAAAATCAAA GCAACCGTGA CCGGCCGGCC GAAACACTAC
TATTCCATTT ACCAGAAGAT GATTGTGCGC GGCCGGGATT TCGCCGATAT TTATGACCTT
CTCGGCGTCC GCGTTCTCGT TGACACCGTG CGCGACTGCT ACGCCGCGCT CGGCATCATC
CATGCGATGT GGAATCCGGT TCCCGGCCGG TTCAAGGATT TCATCGCGAT GCCGAAATTC
AACCTCTATC AATCGCTGCA CACGACGGTC ATCGGCCCGG AAGGCAAACC CGTCGAGGTG
CAGATCCGGA CGCATGCCAT GCACCGGCGC GCCGAGTACG GCATCGCCGC GCACTGGAAA
TACAAGGAAG AAGCCACCGG TTCGTCCACC AAGGGCTCCG GGAACGACAT GGCCTGGCTC
CGGCAGCTTC TCGACTGGCA GAAGGAAGCC GCGGATCCAG GGGAATTTCT CGAGTCCCTG
CGTTTTGACA TCCGCGGCAA TGAGGTCTAC GTCTTCACGC CGAAGGGCGA CGTCCTGGCC
TTGCCGCAAG GGGCGACGCC GGTCGACTTC GCGTACGCCG TGCACACCGA GGTCGGACAC
CGATGCATTG GCGCCCGGGT GAACGGCCGG CTCGTACCGC TCGACAGTGT GCTTGACAAC
GGTGACGTCG TCGAGATTTT CACCTCCAAG GCGCCCGGCG CCGGCCCGAG CCGTGACTGG
CTCACCTTCG TGAAGAGCGC CCGCGCCCGG ACGAAAATCC GGCAATGGTT CGCCAAAGAG
CGCCGGGAAG ACGCGATCGA AGAAGGCAAA CAGGCGATCG CCCGGGTGAT GCGCAAGCAG
GGGCTGCCCC TGCAGCGGCT CCTCTCCGAC GACGCGCTCG GCACCCTCGC CCGGGACATG
CACTACACCG ACATTTCCGC GTTGTACGCG GCGGTCGGCG AGGGGCACCT CAGTGCACAG
GCCGTCGTCC AACGGTTGCT GCAGGCGCGG GGCGGCGAGG AAGGCGCGGT CGAAGACCTC
GCCGAGGCGG TCACCCCGAG TAGACAGCGG GGACGACGTG CCCGGCCGGC GGGAGATCCC
GGCGTCGTGG TGAAGGGGGC GAGCGACGTC TGGGTCAAAC TCGCCCGGTG TTGCACCCCG
GTTCCCGGCG ACGCGATCCG CGGATTCGTC ACCCGGGGCA ACGGCGTGTC GGTGCACCGC
AGCGATTGCG TGAACCTTGT CGCCATGCTG GCCAACGAAC CGGACCGAGC GGTCGAGGTC
GAATGGTCAC CGAGCTCCGG ATCGCTCTTC CTGGTCGTCA TTCAGGTGGA GGCGCTTGAT
CGCAGCCGGT TGCTGGCCGA CCTCACCCAG GTGCTCTCCG ACCAGCACGT CAACATCCTC
GCGGCGTCGG TGACAACCAC CCGGGACCGG GTAGCGATCA ACCGGTTCAC CTTCGAGATG
GCCGATCCGA CGCACCTCGG GCACGTGCTC CGCGCGGTCC GCGCGGTCGA CGGGGTCTAC
GACGCCTACC GGGTTACCGG CGGGGTGGCC AACACCCGGG CGTCGACACC CCAGCCGGCC
TGA
|
|---|
| Protein sequence | MEHRASVDEA AGALAGSDYD QSPDSAPNRD ELAGSPAPGG SPAPGGSSDA AERVDDVAAT
SPSGGRRVRS RLARLAAQRG GTIPVLEPLI RTIRASHPKA DVRDVQRAYE VAEFYHRGQL
RRSGDPYITH PLAVATILAE LGMTPPTIVA ALLHDTVEDT TYTLDQLRRD FGDEVASLVD
GVTKLDRVKY GDAATVETVR KMVVAMARDP RVLVLKLADR LHNMRTLRYL PPEKQERKAR
ETLEIYAPLA HRLGMNTLKW ELEDLSFATL YPKRYEEIAR LVAERAPSRD TYLANVIEQV
SAQLRAAKIK ATVTGRPKHY YSIYQKMIVR GRDFADIYDL LGVRVLVDTV RDCYAALGII
HAMWNPVPGR FKDFIAMPKF NLYQSLHTTV IGPEGKPVEV QIRTHAMHRR AEYGIAAHWK
YKEEATGSST KGSGNDMAWL RQLLDWQKEA ADPGEFLESL RFDIRGNEVY VFTPKGDVLA
LPQGATPVDF AYAVHTEVGH RCIGARVNGR LVPLDSVLDN GDVVEIFTSK APGAGPSRDW
LTFVKSARAR TKIRQWFAKE RREDAIEEGK QAIARVMRKQ GLPLQRLLSD DALGTLARDM
HYTDISALYA AVGEGHLSAQ AVVQRLLQAR GGEEGAVEDL AEAVTPSRQR GRRARPAGDP
GVVVKGASDV WVKLARCCTP VPGDAIRGFV TRGNGVSVHR SDCVNLVAML ANEPDRAVEV
EWSPSSGSLF LVVIQVEALD RSRLLADLTQ VLSDQHVNIL AASVTTTRDR VAINRFTFEM
ADPTHLGHVL RAVRAVDGVY DAYRVTGGVA NTRASTPQPA
|
|---|
| |