Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1312 |
Symbol | |
ID | 4485467 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 1460702 |
End bp | 1461367 |
Gene Length | 666 bp |
Protein Length | 221 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 639730092 |
Product | fimbrial assembly family protein |
Protein accession | YP_873070 |
Protein GI | 117928519 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 0.714725 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 0.0049251 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
| |
Sequence |
Gene sequence | ATGAGTGTGA CTACAACCAC CCGTGTCGGT GACTTGCCCC GGGTCAATCT GCTGCCGCCG GAGCTGCACG AACGGCGGCG GGTCCGTGCG GCTCAGGCGG GTGCCGGTGC GGCCATCGCT CTCGCATTGG TCGGAGTGGT TTTCGCTTAC ACGCAACAAG GGCATGCGGT TGACACGGCG AAGAAGCAGC TCGCCGATCA GCAGCAGCAG GAAACGCAGC TCACGGCGCA GCTTCGCCGT CTGAGTGACG TGCGCACGAC GGCGGCACAG CTTGCGGCGT CGGAGGCTTT GCTGAGCCGT GCGATGGCCA CCGAAATTCA GTGGTCCACG TTTCTGGCCG ATTTCAGCGT TATTGTTCCC AATTCGGTCT GGCTCGTTCA GCTCAACGCG CAGGAAGATG TGCAGCCGGG GACTCTCGCC GCACCGAATG CCGCGCCGCA GACGGTCGGG TCGGTGACGC TGCAAGGCTA CGGAAAGGCG TGGCCAGATC TGGCGACCTT GCTCGATTCG TTGGGGAAAG AGACGTCGCA CGGAATTGTC CAACCGTACT TTAGTACCGC GCAAGAGACG TTCATCGGAA CGGTGAAAGT CATCCAATAT CAGGCATCGA CGGCGCTGTC ACCGGCGGCC CTCTCCGGCC GGTGCGTGAA TCCTGGGAGT TGTTGA
|
Protein sequence | MSVTTTTRVG DLPRVNLLPP ELHERRRVRA AQAGAGAAIA LALVGVVFAY TQQGHAVDTA KKQLADQQQQ ETQLTAQLRR LSDVRTTAAQ LAASEALLSR AMATEIQWST FLADFSVIVP NSVWLVQLNA QEDVQPGTLA APNAAPQTVG SVTLQGYGKA WPDLATLLDS LGKETSHGIV QPYFSTAQET FIGTVKVIQY QASTALSPAA LSGRCVNPGS C
|
| |