Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1279 |
Symbol | def |
ID | 4486350 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 1426434 |
End bp | 1426976 |
Gene Length | 543 bp |
Protein Length | 180 aa |
Translation table | 11 |
GC content | 66% |
IMG OID | 639730059 |
Product | peptide deformylase |
Protein accession | YP_873037 |
Protein GI | 117928486 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0242] N-formylmethionyl-tRNA deformylase |
TIGRFAM ID | [TIGR00079] peptide deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.00526616 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.0870351 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGGCTGTCC GACCCATCCG GCTTTTCGGT GATCCAGTCC TGCGCACTCC TGCGGAACCG GTCACCGATT TCGACAAGGA GCTCCGCGTC CTGATCAAGG ACCTCATTGA GACGATGCAG GACGCGCCCG GGGTCGGCCT TGCCGCGCCG CAGATCGGGG TGAGCCTCCG GGTCTTCGTG TACGACGTTG ACGGTGTCGT CGGACACCTG GTCAACCCAT CGTTGGACCT CTCCGAGGAG CAGCAGGACG GCGACGAGGG GTGCCTCTCC CTGCCGGGGC TCTCCTATCC GCTGAAACGT GCGAAGCGGG CGGTCGCCAA GGGATTCAAC GAATTCGGCG AACCGGTCAT CCTCGAAGGC AGCGACCTGC TGGCCCGGTG CGTGCAGCAC GAGACCGACC ACCTGGACGG CGTCCTGTTC ATTGATCGCC TCGATCCTGA GCAGCGGAAG CTCGCCATGC GTGCGATCCG GGAGGCCGAA TGGGCCGGCC AGACCGTCCG GGTCAAGACC TCCCCGCACC CCACGCGGGG AAAGGCACTG TAG
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Protein sequence | MAVRPIRLFG DPVLRTPAEP VTDFDKELRV LIKDLIETMQ DAPGVGLAAP QIGVSLRVFV YDVDGVVGHL VNPSLDLSEE QQDGDEGCLS LPGLSYPLKR AKRAVAKGFN EFGEPVILEG SDLLARCVQH ETDHLDGVLF IDRLDPEQRK LAMRAIREAE WAGQTVRVKT SPHPTRGKAL
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