Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_1236 |
Symbol | |
ID | 4486684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 1376377 |
End bp | 1377186 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639730013 |
Product | ribosomal large subunit pseudouridine synthase B |
Protein accession | YP_872994 |
Protein GI | 117928443 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1187] 16S rRNA uridine-516 pseudouridylate synthase and related pseudouridylate synthases |
TIGRFAM ID | [TIGR00093] pseudouridine synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 0.862824 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAGTAACA CCCGGTCCTC ACCTGGCCCG CGCGGGCTGG CTCCGCATTC CCGGGCGGCT GCCCTCTCCT TACCCGCCGG CGACGACGGC GCGGTTCGCT TGCAGAAGGT CCTTGCCGCT GCGGGCGTGG GATCGCGGCG GGCGTGCGAG GAGCTCATCG CGGCCGGCCG GGTGGAGGTC GACGGCGTGC CGGTCACCCG GCTCGGCGTG CGCGTCGATC CGCAGACCGC CGTCATCCGG GTCGACGGAA AGCGGATTCC GCCGGCAACT CCGTTCGCTT ACTTCGCGTT GAACAAACCG CGCGGTGTCG TGACGACGAT GAGCGATCCG CGCGGACGCC CGTGCGTCGG GGATCTCGTC GCCGACCTTC CCGTGCGGGT CTTCCACGTC GGCCGGCTCG ACACCGACAG TGAGGGACTT CTCCTGCTCA CCAATGACGG GCGGCTTACC CACCGTCTGA CACACCCGTC GCATGCCGTG CCGAAAACCT ACGTCGCCGA CGTCGAGGGT CGCCTCGGCC GCACCGGCGT GCACCTGCTC CGCTCGGGGG TTGATCTCGC CGACGGACCG GCCCAAGCCG ACGCCGTCCG CATTCTCGAG CGCTACGGTG CTCGGACCCT GGTTGAAGTG GTTGTTCACG AGGGTCGCAC CCATTTGGTA CGACGGATGC TTGCGGCCGT CGGTCATCCG GTGCGGCGGT TGGTGCGCAC CGCGATCGGG CCGGTCGCGT TGGGACAGCT CCGGCCGGGC GCGCGCCGGC AGTTGACGCC TCGGGAACTC GGGGAGTTGC TCGACCTGGT CGGCCTCTAA
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Protein sequence | MSNTRSSPGP RGLAPHSRAA ALSLPAGDDG AVRLQKVLAA AGVGSRRACE ELIAAGRVEV DGVPVTRLGV RVDPQTAVIR VDGKRIPPAT PFAYFALNKP RGVVTTMSDP RGRPCVGDLV ADLPVRVFHV GRLDTDSEGL LLLTNDGRLT HRLTHPSHAV PKTYVADVEG RLGRTGVHLL RSGVDLADGP AQADAVRILE RYGARTLVEV VVHEGRTHLV RRMLAAVGHP VRRLVRTAIG PVALGQLRPG ARRQLTPREL GELLDLVGL
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