Gene Acel_1228 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1228 
Symbol 
ID4486169 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1367396 
End bp1368211 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content69% 
IMG OID639730004 
Producthypothetical protein 
Protein accessionYP_872986 
Protein GI117928435 
COG category[S] Function unknown 
COG ID[COG3879] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.861927 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCTGAGC AGTCTGTGGA CGAGCAGTCC GCCGGCGGGG CGCGTCGCGG CCGGCGGTTC 
GGCCCGTTTC GCGGCCAGCT CGCGATTGCG GTGCTCTGTG GGCTGCTCGG TTTCGCCATC
GTGACCCAGG TGGACACCGC CGCCTCGGCG AAGCTGAAGG CCGCCCGGCA ACCCGACCTG
GTCGACGTCC TCGACAATCT CAACACCCGC GCGGATCAAC TGCGTGCGCA AATCGCCGCC
CAGGAGAGCA CCCTGAACGA TCTGACCAGC GGCACCGATC AGACCCGGGC GGCACTCACG
GAAGCACAGC GGCAACTGGA GGCACTGGAG GTCTACGCCG GCACGGTTCC CGTCGCCGGG
CCCGGCATCG ATCTGGCGAT TGACGACCCC ACCCATGCCG TCACCGCCGA CGTGCTCGTC
GACACCATTC AGGAATTGCG GGACGCCGGG GCGGAAGCGA TCGAAATCAA GGGTTCGCCG
TTGCCCTCGA CCCGGACGCC TGCGAACGGA GCCGGCCCGT CGGCCGCTCA GCCGGACGTC
CGGCTGATTG CCAGCAGCTA CGTGCTCAAC GCGTCGGACG GCCAGGGCAT TGTCGTGGAC
GGCGTCGCAA TGGCCCCGCC GTACGACGTC GTCGCGATCG GTGACCCGCA GACCCTCGAT
CGCGCCCTTG GCATTCCGGG CGGTGTGCTC GACACCCTCA AGAGCAAGAA CGCCCGCGGT
ACGGTGGTGC GGCACGAGCG GGTCGAGATC ACGGTCGTCC GAACCCCGGC GGCACCCTCG
CATCTTGAAC CGGTACCGTC GGTCTCAACG AAGTGA
 
Protein sequence
MAEQSVDEQS AGGARRGRRF GPFRGQLAIA VLCGLLGFAI VTQVDTAASA KLKAARQPDL 
VDVLDNLNTR ADQLRAQIAA QESTLNDLTS GTDQTRAALT EAQRQLEALE VYAGTVPVAG
PGIDLAIDDP THAVTADVLV DTIQELRDAG AEAIEIKGSP LPSTRTPANG AGPSAAQPDV
RLIASSYVLN ASDGQGIVVD GVAMAPPYDV VAIGDPQTLD RALGIPGGVL DTLKSKNARG
TVVRHERVEI TVVRTPAAPS HLEPVPSVST K