Gene Acel_1194 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1194 
Symbol 
ID4485516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1329285 
End bp1331609 
Gene Length2325 bp 
Protein Length774 aa 
Translation table11 
GC content64% 
IMG OID639729970 
Productnucleic acid binding, OB-fold, tRNA/helicase-type 
Protein accessionYP_872952 
Protein GI117928401 
COG category[E] Amino acid transport and metabolism
[K] Transcription
[L] Replication, recombination and repair 
COG ID[COG0531] Amino acid transporters
[COG1200] RecG-like helicase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.701127 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones40 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACCATC AGATCTCCTC TTCCCCAGCC GCTGTTGACG CCCTACCGCT GCCCCATCCC 
CCTGCGCTCC GGGAATCCCT TGCGTACCGG CTGAAGTGCC GGCTCCTGGG CCCGCCGTTG
GTGACCGCGC GGTTGCGTCA CGAACGGCTC TCGGAGCCGG TCGCACTGGG CGTGCTGTCA
CCGGATTGCA TCTCGTCCTC GGCATACGGT CCGGAGGAGA TGCTCATCGA GTTGCTTCCG
TATTTCGGCG TGCTTGCGTT CACCTTGGTG TTGCCGGTTA CCGCGACGAT TCTCTTTATC
TTGCTATTGC TCACATTCTC GTACCGGGAC GTCGTCAGCG TCTATACGCG ATCCGGCGGC
AGTTATGTCG TCGCCCGGGA GAATTTCGGC CCGCGGGTGG CCCAGATCGC CGCAGTCGCC
CTGCTGATTG ATTATGTCGT GACGGTGGCC GTGCAGTGCT CAGCTGGTAC GGTTGCCGTG
GCCTCCGCGA TTCCCGCGCT CGGTCGGTAC AGTCTAGAGA TCACGATTGG TGTTGTCCTG
CTCATTGCGT ATGGGAATCT GCGTGGCATC CGCGAAGCCG GGCGGTCTTT TGCCGCTCCG
ACGTACCTGT ACGCCTTCTT CATGGTCGTA ATGATTGCGG TCGGCCTGGT TCGAGCCGCC
CTTGGCACAC TGCCTGCTGT CGATCCGAGG ACGATTTCTG ACGCCCTTCC TGTCGGTCAT
CACTCGGATG TGCTCTCCTT CGCTGCGATC TTCGTTCTCC TGCGGTCGTT TGCCAACGGC
GGTTCCTCGC TCACCGGTTT TGAAGCAATT TCCAACGGCA TCAGCGTGTT CCGGCAGCCG
GAGTCGGTCC ACGCCCGGCG CGTTCTCGTC GCCATGGCGC TGATTCTCGG CGTTCTCGTC
GGCGGCGTCT CCCTGCTCGC CTATCTGACG CACGTGCCGC CCCGGGTGAC CGGTTATCCG
TCGGTGGTCG CGCAGGAGGC GCGGCTCGTC TTCGGCGACG GGGTTGCCGG ACACGTGCTC
TTCGCTCTCC TGCAGATCGC GAGTGCCCTC ATCCTGTACA CCGGCGGGAA CACAAGCTTC
AACGGCTTTC CGTTCCTTGC CAGCTTTGTC GCCGAAGATT CGTTCCTGCC TCGTCAGTTG
ACGAAGCGGG GCCATCGATT GGTGTACTCC AACGGGATCA TCGTCCTGAC AGCCGTGGCC
GTGGCGTTGC TGCTCGTCAC CGGCGCCCGG GTCAACGCAC TCGTTCCGTT TTACGCCATC
GGCGTCTTCA CCGGCTTCAC GATGGCCGGA GCCGGGTTGG TGCGCTACCA CTGGCGGCGG
CGTGGCACCG GTTGGCGTCG GTGGGTTGTC ATCAACTTTC TTGCCGCTGT CATGTGTGCA
GCGGTCGTCC TCATTTTCGC CATCGTCAAA TTCACCGAAG GCGCGTGGGT CGTCGTCGTA
CTTTTCCCGA TACTGGTCTT TGCACTGATC CGTATCAACG AGCGCTACCG GGCGGAGCAG
GCCGCGCTCG CTGCGCAACG CGATCAGGTG CTCACACCGG CGAATTACGT TCGCCACCAG
GTGTACGTGC TGGTCAACGA GATAGACCTG GCAAGCCTCG CGGCATTGCG TTACGCCGCG
ACGCTGCGTC CGACGACGCT GTCCGCCGTG CACGTGGCGA TCGACGGCCC GCATGCGCGG
ACCCTGCAAG ACGACTGGCA GCGCATTATC CAGCGGATAC CGCTGGAGAT TGTGAACTGC
CCGGATCGGC GGCTGGAACG TGCCGTCATG CAACTGGTTT TCCAGGCCGC CCAACGGCCG
GGGACCCACG TGACCGTCGT CCTGCCGCGC CGGCGCTTTG GATGGCTCGG CCAACTCATG
CATGACCGGA CCGCCGACAA GCTGGCCGGC ATTATCAGCC GGATCCCGAA CGTCGTGGCG
ACCATCGTGC CCCACGACGC GTTGCCCCGG GAATTCGGCC GCCGCCACGC AGCAGCAATG
GCCGAGCGGC AGGTGACCAA CGAAGGCGCC ATCGCACGGA GCGCGCCGCC GGACGGGCTG
GTCGCCGATG ACGGAGCCAC CCGAATCGCC GCCCTGCGAT GGCGGCAGAC GGCGACCGTC
GTCGGACGCA TTCATTCCGT TGAGGTGCAA CCGGTCGGCG CCGCACCGAC GCTCCGGTGT
GAAGTCTTTG ACGACACCGG GGGGATTCAA GTCTTGTTTC TCGGCCGACG GACCATTCCG
GGGATCGAGC CCGGGCGGTG CATCCGACTG ACCGGAACAG TGACCGAGCA CCGGGGCAGT
CTGGCGATTT TCAATCCGAA ATACGAACTG CTGACCGAAC CGTGA
 
Protein sequence
MDHQISSSPA AVDALPLPHP PALRESLAYR LKCRLLGPPL VTARLRHERL SEPVALGVLS 
PDCISSSAYG PEEMLIELLP YFGVLAFTLV LPVTATILFI LLLLTFSYRD VVSVYTRSGG
SYVVARENFG PRVAQIAAVA LLIDYVVTVA VQCSAGTVAV ASAIPALGRY SLEITIGVVL
LIAYGNLRGI REAGRSFAAP TYLYAFFMVV MIAVGLVRAA LGTLPAVDPR TISDALPVGH
HSDVLSFAAI FVLLRSFANG GSSLTGFEAI SNGISVFRQP ESVHARRVLV AMALILGVLV
GGVSLLAYLT HVPPRVTGYP SVVAQEARLV FGDGVAGHVL FALLQIASAL ILYTGGNTSF
NGFPFLASFV AEDSFLPRQL TKRGHRLVYS NGIIVLTAVA VALLLVTGAR VNALVPFYAI
GVFTGFTMAG AGLVRYHWRR RGTGWRRWVV INFLAAVMCA AVVLIFAIVK FTEGAWVVVV
LFPILVFALI RINERYRAEQ AALAAQRDQV LTPANYVRHQ VYVLVNEIDL ASLAALRYAA
TLRPTTLSAV HVAIDGPHAR TLQDDWQRII QRIPLEIVNC PDRRLERAVM QLVFQAAQRP
GTHVTVVLPR RRFGWLGQLM HDRTADKLAG IISRIPNVVA TIVPHDALPR EFGRRHAAAM
AERQVTNEGA IARSAPPDGL VADDGATRIA ALRWRQTATV VGRIHSVEVQ PVGAAPTLRC
EVFDDTGGIQ VLFLGRRTIP GIEPGRCIRL TGTVTEHRGS LAIFNPKYEL LTEP