Gene Acel_1178 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1178 
Symbol 
ID4485066 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1309558 
End bp1312101 
Gene Length2544 bp 
Protein Length847 aa 
Translation table11 
GC content65% 
IMG OID639729954 
Producthypothetical protein 
Protein accessionYP_872936 
Protein GI117928385 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG4591] ABC-type transport system, involved in lipoprotein release, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.883962 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.792877 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTCCGGG TGAGTCTGCG GACCCTCGTC GCGCACAAGG TGCGGTTGGT GTTGACGGCG 
CTTGCGGTTG TCATTGGCGT GGCTTTTCTG GTCGGCACGC AAATTTTCAG CGACACCCTT
CGCGCGACGT TCAATGACTT GCTGGGCCGG ACGAGCAAGA ATCTTAGCGT TGTCGTGCGG
GCCAAGACGG ACTTCTCGGC GAACGATTTC GCGAGCGCCG GAACCCGGCC GCTGGTGCCC
GAGTCGATGG TCGCGAAGGT GGCCGCCGTG CCTGGAGTCG CCGCCGCGGT CGGCTCCGTC
TCCGGGCTGG ACACGCTGGT CACGGTGGAC GGCCGTCCGA TCGTGCCCAA GACCTTTGGG
CCGCCCACGT TGGCCGTTTC GTGGACGCCG TCGAATTTCG GCAGTCTGGA ATTCGTCGCC
GGTCACGGGC CGACGGGACC GGGCGAGGTG GCGATCGACA AGGCCGCGGC GGACCGTTTC
CATCTGCACG TCGGTGATCC GGTGGTGGTG CAGACGCAGC ATCAGCCGAT GCGCATGCGG
ATCGTCGGTA TCGTTACGGT TGGAGCGAGC AGCAACTTGG CCGGTGCGGT GCTCAGCGTA
TTCGATCTGG CCACAGCCCA GCAGGTCGTC GGCAAGCCGG GGTACGTCAA CGAGATCGAC
GTCCAGGCCC GACCGGGAAT CAGCCAGGAA GAATTGGCCA GGCGGATTCA GGCTGCGCTG
CCGGCGAATC TCGAAGCCGT GACGGCGAAG AAGGTGACGC AGGAAACAAC GGCCGCCATC
AGTAAGGGAC TCGGTTTCTT CAACACATTC TTGTTGGTCT TCGCGGGCAT TGCGTTGTTC
GTCGGACTGT TCATCATCGT CAACACGTTC ACCATGCTCG TCGCGCAACG CACGCGGGAG
CTGGCGCTGC TCCGGGCGGT CGGCGCGAGC CGGGCGCAGG TTGTCGGCGC GGTGCTCATC
GAAGCGGCAG TCGTCGGCGC GGTCGCCGCG ACGATCGGCA TCGGCTTCGG CGTGCTCGTC
GCGCTTGGTG TTCACGGTCT GCTGTCGGCG GTCGGCGTCG GACTGCCGGC CAATTCCCTA
GTGATAACAG GCAAGACCGT TGTCGCGGGA TATCTGGTCG GCATCTTGGT CACCGTGCTC
GCTGCGATCG CCCCGGCACT GCGGGCATCC CGGATTTCGC CGGTCGCTGC GATGCGGGAC
ACGGTCGCGC TACCCGAGCG GTCGTTGCGG GCCCGCAGCA TCATCGGGGC CGCCGGTATC
GTCATCGGAA CGGCACTCAT CGCGTCCGGG GCCGGTCGCA GCGGTGGTCA AGCTGCTGCA
CTGGTCGGCG TCGGTGCGAT GCTGGTTCTC GTCGGTGCGT GGTTTGCCAG CGCGTGGGCT
GGGCGGCCGA TCATCCATGT CCTCAGCGCG CCGCTGGTGG CGGTCGTTGG TGTCACCGCG
CGCCTTGCAC GACTGAACGC CATTCGCAAT CCGCGCCGGA CGGCGGCCAC CGCCGGGGCG
CTCATGATTG GGCTAGCTCT TGTCTCGGCG CTCTCGGTGC TCACCGCATC GACAAAGGCG
TCCATCGCGT CGCTGGTGGA TCGCAATTTG GGTGCCGACT ATGTGCTGGT CAGTGACGGC
TACGGTTTCT CCCCTGATGT CGCCGCGCGC GCTGCGGCAA CACCCGGTGT CGCCGCGGTG
GCGGAGACCC GGGCCGGGGC GGCCATCATC AAGGGCAGGA CGGCACCGAT CGCGGGGGTC
TCGCCGAATA TCGGCTCGAT GATCGCCATT CAGATGACGA GCGGATCGCT GGACGCGTTG
CAGGCCGGTG AGCTGCTGGT GTCCCAGACC CAGGCCGGCC GTATCGGCGT CACAGTAGGC
GACCGGGTGC CCATTGAGTA CGGCGATGGT TTCAAGGGAT CGATCCGCGT CGGCGGTATT
TACGAGAACA ACAATCTGCT CGCCAACGGA GGCGTCGGGT ATCTCATCAC CATGAGCCTC
TTCGCGCAGC ACTACGACGT TCAGCGCGAC GTCATCGCGT ACGTGGAGGC GAAACCCGGC
CAGCAGGACG CGGTGGCGGC GGCGCTCACC AAGCAGCTGC GACTCTATCC GCAGATTCAC
GTGCAGAGCC AAGCCGAGTA CAAGAAATCG ATTCTCACGC AAGTCAATCA GATCGTCGGG
CTCATCATCG GCCTGCTCGG CGTGGCACTC GTGGTGGCGA TTCTCGGCAT CGTCAATACG
TTGGCGCTCT CGGTCTATGA ACGGGTCCGG GAAATCGGAT TGTTACGCGC GGTCGGCATG
ACCCGTCGTC ACATTCGGAC GATGGTCGAG CAGGAAGCTC TCATTATCGG TGTCTTCGGC
GCGCTGCTGG GCGTCGTGCT GGGAACGCTC TTCGGTCTCG CCCTGGTCGC AACCAGCGGA
AATCAGATTG ACCACGTAGT CGTTCCGGTG GGTCAGCTCA TCAGCTACCT CATCGTCGCT
GGGATACTCG GCCTGCTGGC GGCGGTCTGG CCGGCATGGC AGGCCGGACG GCGATCGATC
CTCGCCGCGA TTGCCACCGA ATAG
 
Protein sequence
MFRVSLRTLV AHKVRLVLTA LAVVIGVAFL VGTQIFSDTL RATFNDLLGR TSKNLSVVVR 
AKTDFSANDF ASAGTRPLVP ESMVAKVAAV PGVAAAVGSV SGLDTLVTVD GRPIVPKTFG
PPTLAVSWTP SNFGSLEFVA GHGPTGPGEV AIDKAAADRF HLHVGDPVVV QTQHQPMRMR
IVGIVTVGAS SNLAGAVLSV FDLATAQQVV GKPGYVNEID VQARPGISQE ELARRIQAAL
PANLEAVTAK KVTQETTAAI SKGLGFFNTF LLVFAGIALF VGLFIIVNTF TMLVAQRTRE
LALLRAVGAS RAQVVGAVLI EAAVVGAVAA TIGIGFGVLV ALGVHGLLSA VGVGLPANSL
VITGKTVVAG YLVGILVTVL AAIAPALRAS RISPVAAMRD TVALPERSLR ARSIIGAAGI
VIGTALIASG AGRSGGQAAA LVGVGAMLVL VGAWFASAWA GRPIIHVLSA PLVAVVGVTA
RLARLNAIRN PRRTAATAGA LMIGLALVSA LSVLTASTKA SIASLVDRNL GADYVLVSDG
YGFSPDVAAR AAATPGVAAV AETRAGAAII KGRTAPIAGV SPNIGSMIAI QMTSGSLDAL
QAGELLVSQT QAGRIGVTVG DRVPIEYGDG FKGSIRVGGI YENNNLLANG GVGYLITMSL
FAQHYDVQRD VIAYVEAKPG QQDAVAAALT KQLRLYPQIH VQSQAEYKKS ILTQVNQIVG
LIIGLLGVAL VVAILGIVNT LALSVYERVR EIGLLRAVGM TRRHIRTMVE QEALIIGVFG
ALLGVVLGTL FGLALVATSG NQIDHVVVPV GQLISYLIVA GILGLLAAVW PAWQAGRRSI
LAAIATE