Gene Acel_1122 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1122 
Symbol 
ID4485178 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1246287 
End bp1247051 
Gene Length765 bp 
Protein Length254 aa 
Translation table11 
GC content71% 
IMG OID639729897 
Product6-phosphogluconolactonase 
Protein accessionYP_872880 
Protein GI117928329 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0363] 6-phosphogluconolactonase/Glucosamine-6-phosphate isomerase/deaminase 
TIGRFAM ID[TIGR01198] 6-phosphogluconolactonase 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00568285 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCCGCC AGATCATCAT CCATCCGGAC GCCGGGACTC TCGCCGCTGC AGTCGCGGCC 
CGCCTGATCA CCCGGCTCAT TGACATGCTT GCGGCGCAGG CCGAAGCTCA CCTTGCGCTC
ACCGGCGGCC GGATCGGCAC CGCTGTTCTC GCGCAGGTTG CCGACTCTCC GGCGTGCCGC
GCGCTCGATT GGTCCCGGGT GAACGTTTGG TGGAGTGATG AACGCTTCGT TCCGGCTGGA
CATCCCGACC GGAACGACGC CGCGGCGCAC GCTGCACTCC TCGGCAAGGT GCCGGCCGAT
CCTCGACGGC TGCACCCGAT GCCGGCAGCG GACGGTCCGC AGTCTGACCC GCACGAAGCG
GCCCGGCGGT ACGCCGCGGA ACTGGCGGCC GCCGCCGGAC CGCACCGCTC GGTGCCGGCG
TTCGATGTGC TTCTGCTCGG CGTCGGTGAG GACGGGCACG TCGCCTCGCT CTTCCCTGGC
TCGCCGCTGC TCGCCGCGAC CGATCCGGTC GTCGCGGTGC GGGATGCGCC GAAACCACCC
CCAACCCGGC TCTCGCTCTC GTTACCCGCC CTCAACGAGG CGCGCGAGAT CTGGCTGGTC
GTCGCCGGGC CGGAGAAGGC AGCTGCCGTG CGGCAGGCGG TTGGCGGCGG CGGTCTTCCC
GCGGGACAGG TCGCCGGCCG GGAGCGGACC CTCTGGTTGA TCGACGAAGC GGCTGCGACG
GGATTGGCAA GCCGTTCTCC CGGGTGGACA AGCCCTACGT CATGA
 
Protein sequence
MTRQIIIHPD AGTLAAAVAA RLITRLIDML AAQAEAHLAL TGGRIGTAVL AQVADSPACR 
ALDWSRVNVW WSDERFVPAG HPDRNDAAAH AALLGKVPAD PRRLHPMPAA DGPQSDPHEA
ARRYAAELAA AAGPHRSVPA FDVLLLGVGE DGHVASLFPG SPLLAATDPV VAVRDAPKPP
PTRLSLSLPA LNEAREIWLV VAGPEKAAAV RQAVGGGGLP AGQVAGRERT LWLIDEAAAT
GLASRSPGWT SPTS