Gene Acel_1119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1119 
Symbol 
ID4485175 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1243856 
End bp1244968 
Gene Length1113 bp 
Protein Length370 aa 
Translation table11 
GC content67% 
IMG OID639729894 
Productoligopeptide/dipeptide ABC transporter, ATPase subunit 
Protein accessionYP_872877 
Protein GI117928326 
COG category[E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism 
COG ID[COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component 
TIGRFAM ID[TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.00682246 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCGGCG AGTTGGTGAA CGGCTCCTTC ACCCCGACGG CCGCAACCGG GTCGAACGGC 
CTGCTCACGG TGGCGGACTT GCACGTGGAC TTTCCGACGG ACGACGGCAT CGTCCGGGCG
GTCCGCGGCA TGTCGTACAC CCTCGCCCCT CGGGAAGTGC TGGGCATCGT CGGTGAATCC
GGTTCGGGAA AATCGGTCGC GTCACTCGCG GTGATGGGTC TGCTGCCGAA AAACGCCCAA
GTACGGGGCA CCGTCCGGTT CCGGGACGAA GACCTGCTGG GCCTGACGGA GAATGGTTTG
TCCCGCTACC GCGGCGAGCA CATCGCGATG ATTTTCCAGG ATCCGATGAC CAGCCTGAAT
CCGGTGTACA CCGTCGGTTG GCAGATCGTC GAGGCCATCC GCGCCCATCG CGATATCAGC
AAGCCCGCCG CACTCCGCCA GGCGGTCGAA CTGCTGCGGG TGGTCGGAAT TCCGCATGCC
GAAGAGCGGG TTCACAATTA TCCGCACGAA TTCTCCGGCG GCATGCGGCA GCGGGCCGTC
ATCGCCATGG CCATCGCCAA CGATCCCGAC GTCATCATCG CGGACGAACC GACGACCGCG
CTTGACGTCA CGGTGCAAGC GCAGGTGCTG GAGAGCTTGC GGGCGGCCCG GGAGCGCACC
GGCGCTGCAA TGATCCTCAT CACCCATGAC CTGGGGGTGG TCGCCGGCCA GGCGGATCGG
GTCCTCGTCA TGTACGCCGG CCGGGCGGTC GAAGTCGGCA CGGCCGACGA CGTGTTCTAT
CGACCCCGGA TGCCGTACAC TCTCGGCCTG CTCGGCAGCC TGCCGCGGCT GGACAGCACC
GGACGGCGCC GGCTGACGCC CATCCAGGGT TCCCCACCGT CACTGATCAA CCTGCCACCG
GGCTGCCCGT TCGCGCCACG CTGTCCGATC CGGCAACCCA TGTGTCTGGT CGAGGAGCCT
GAGCTTCGCC CAACGGATCG TCCGGACCAC TTGGCGGCAT GTCATTTCAG CGACCAGCTG
GTGGGTGTCT CCCCGGGTGA TCTGTTCCGC CCGACCGCCC GAGACGATGT GCTCCCGGCA
GAGGGGGAGC CGGGACCGGA GGTGTCCTCG TGA
 
Protein sequence
MTGELVNGSF TPTAATGSNG LLTVADLHVD FPTDDGIVRA VRGMSYTLAP REVLGIVGES 
GSGKSVASLA VMGLLPKNAQ VRGTVRFRDE DLLGLTENGL SRYRGEHIAM IFQDPMTSLN
PVYTVGWQIV EAIRAHRDIS KPAALRQAVE LLRVVGIPHA EERVHNYPHE FSGGMRQRAV
IAMAIANDPD VIIADEPTTA LDVTVQAQVL ESLRAARERT GAAMILITHD LGVVAGQADR
VLVMYAGRAV EVGTADDVFY RPRMPYTLGL LGSLPRLDST GRRRLTPIQG SPPSLINLPP
GCPFAPRCPI RQPMCLVEEP ELRPTDRPDH LAACHFSDQL VGVSPGDLFR PTARDDVLPA
EGEPGPEVSS