Gene Acel_1105 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1105 
Symbol 
ID4485768 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1222830 
End bp1224380 
Gene Length1551 bp 
Protein Length516 aa 
Translation table11 
GC content62% 
IMG OID639729880 
Productamino acid permease-associated region 
Protein accessionYP_872863 
Protein GI117928312 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0531] Amino acid transporters 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.536968 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.272162 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAGCG CTTCCGGAGA GCGCGGCGCA ATGCTGGCGG CGGTTGAGGC AAGAGCCCCG 
TCGCGACACC TGTGGCGAGA TCGGATTGCG GTCATCGGCA TTGTTTTTTA TGTGGTTGCG
GCATCCGCGC CGCTGGTTGG CATGTCCGGT GCGGTTCCCG TGGCCATCGG CCTGGGGAAT
GGTTCCGGGA CGCCCGGCGC TTACCTCGCG GTCGGTATCG CGCTCCTCAT CTTCAGCGTG
GGTTACGCCG CCATGAGCAG CAAAGTCACC AATGCCGGGG CATTCTTCGC CTATGTAGGC
CGTGGACTCG GCGTACGGGC CGGAATTTCT TCCGCCTTTG TGTCTATCTT CGCGTACGTC
ACGATCCAAC TCGCGATTTA TGGCTTCATG GGCGGGCTGG TCGCGCAGGA AGCCAAGCAA
TATCTCGGCA TCTCCCTTCC CTGGTGGGGA TGGGTCTTTA TCGCCTGGGG CCTTGTGCTT
CTCCTTTCCC TCTTCAGCGT GGATGTCGGC GCTAAAGTTC TTGGCGGCTT TATGATTCTT
GAGCTGAGCT CGCTCCTCAT CATGGCTTTC GCTGTCATCT TCCGCGGCGG CGGCCCGCAA
GGACTCAGTG TGTCGGCGTC GTTCGCGCCA AGCCATGTCT TCGTCGGCGG CCTCGCCGGA
TCGGCTGGAA TCGCGTTGGC GTTCGCGTTC GCCTCCTATA TTGGCTTTGA GGCGACGGCG
ATTTACGGCG AGGAGTCACG GGATCCGAAG CGTACGGTTC CGGTGGCTAC CTACGCGGCT
GTGGGAACGA TTGCCCTGCT CTTCGCCGTT ACGTCGTGGG GAATTGTGAG CGGCTTAGGG
CAAGGCCGCG TCGTCGACGA GACGCTGAAG ATTTCTACGG TTGGTGATAC ACCGCTGGCG
GATCCCGCAC AAGTCATCTT CCACGTCGCC ACGCAGTACG TTGGATCGTG GCTCGCGGAT
CTCATGCGCA TTCTCGTGAT CTCCAGCCTT TTCGCCGGCC TGCTCGCGTT CCAGAACGCC
AATGCGCGGT ATTTCTACGC GCTGGGGCGT GCCGGCGTCC TGCCGAAGGC TCTGAGTCAC
GTCTCACGGC GCGGATCCCC GATGTACGGA ACGCTGACGA TGTCCGGGCT CACTGCCCTC
GTGGTGCTCA TCTTCATGGC GAAGGGCTGG GACCCGGTGC TCAACCTCTT CTATTGGTCC
AGTGCCATTG CCGTCATGGC GATCGTCATA GTGGAAATTC TGGTCTCCGT TGCGGTGATT
GCCTTCTTCC GGCGTGATCA TTCCGATACC CGGCTCTGGA ACACCGTGGT CGCGCCGATC
CTGGCCATTG CCGCCCTCGG TATCGGTCTC TACCTCCTCA TGGCCCGGTT CGGGCTTCTC
GCCGGTACCG CAGCAGCCGG GGTCGATCCC ACGAAGACGG CGTGGGCGCT GTCACCAACG
GGATGGGTGC TCATTGCGCT GCCGTTCGTC ATGCTCATCG TGGGTCTTGT CGTAGCGCTT
GCCCGACGGC GGAGCATCGA CAGCCAGGTC GTTGCCGATC TGGTGAGCTG A
 
Protein sequence
MVSASGERGA MLAAVEARAP SRHLWRDRIA VIGIVFYVVA ASAPLVGMSG AVPVAIGLGN 
GSGTPGAYLA VGIALLIFSV GYAAMSSKVT NAGAFFAYVG RGLGVRAGIS SAFVSIFAYV
TIQLAIYGFM GGLVAQEAKQ YLGISLPWWG WVFIAWGLVL LLSLFSVDVG AKVLGGFMIL
ELSSLLIMAF AVIFRGGGPQ GLSVSASFAP SHVFVGGLAG SAGIALAFAF ASYIGFEATA
IYGEESRDPK RTVPVATYAA VGTIALLFAV TSWGIVSGLG QGRVVDETLK ISTVGDTPLA
DPAQVIFHVA TQYVGSWLAD LMRILVISSL FAGLLAFQNA NARYFYALGR AGVLPKALSH
VSRRGSPMYG TLTMSGLTAL VVLIFMAKGW DPVLNLFYWS SAIAVMAIVI VEILVSVAVI
AFFRRDHSDT RLWNTVVAPI LAIAALGIGL YLLMARFGLL AGTAAAGVDP TKTAWALSPT
GWVLIALPFV MLIVGLVVAL ARRRSIDSQV VADLVS