Gene Acel_1084 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1084 
Symbol 
ID4484990 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1199011 
End bp1200318 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content64% 
IMG OID639729859 
Productinner-membrane translocator 
Protein accessionYP_872842 
Protein GI117928291 
COG category[E] Amino acid transport and metabolism 
COG ID[COG4177] ABC-type branched-chain amino acid transport system, permease component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.0450701 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.660313 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACACTCC GGCGGGTCTG GGCGTGGGCC ACGAGCCTGC GCGGTCGGCA ACTATGGGTC 
ACACTGGCCG GCGCACTTGT CGTCGACGTG ATGACCGGGC CCTCGGGAAG CCTGAACGAT
CCGACCGCCG GTTTCGCCGG GTCGCTGCTG AGCCGCCGCG TCGGGATCTT CCTCCTCATT
GGGTTTGCCT TCTGGCTTCT CGTCACCTCC CGGGAGCGTC TTGCGGCGTG GTCGCGGAGC
TGGACGGCGG CTGTCCGGCC GAGCCGCTGG CTGCCGTCGC GGTGGTATCG TCTCGCGGCG
TACGGCGTCC TGCTCGCGGT CGCGATCGTC CTTCCGCTTG TCCTCTCCCC GTACTGGCAG
GAAGTGGCGG TCGACCAGAT CGGCGTGTAC GTCCTGCTTG CCCTCGGTCT CAACGTGGTC
GTCGGGCTCG CCGGCCTGCT TGACCTCGGC TACATTGCGT TCTACGCGAT CGGCGCCTAC
TCGTGTGCGT ACTGGACGGA CTCCCTGCCT ATTCATCCGC CGTTCGTGCT CAATCCGTTC
GCCACAATCC CGTTCGCGAT CGCCGCGGCG ATGCTGGCCG GTGTGATCCT CGGCGCGCCG
ACACTGCGGC TCCGCGGTGA CTATTTGGCG ATCGTGACCC TTGGGTTCGG TGAAATCATC
ACGATCTACG CGACGAATCT GCAGAGCGTC ACCGGCGGGT CACCGGGGAA CAGTCGGCCG
ATTCCGCACT TCTCCATCAA CCTCTTCGGC CTGCATTACC GGTGGGGCAT CGACAACATG
CCGTACTATT ACCTGCTGCT GGCCTTCGTC GTGATGGTCA TTGTTTTCTT TCACAACCTG
GAGAACTCCC GGGTCGGCCG GGCGTGGACG GCGATCCGGG AGGATGAAGT TGCCGCCGCA
GCCAGCGGAG TGAACACGTT CCGCTATAAA CTGCTCGCGT TCGCCATCGG CGCGTCCACC
TCCGGGTTTG CCGGCGTATT GTTCGCCAGT AAGATTCAAA CCATTACGCC GCTCAGCTTC
TTGTTGCAGC AGTCCATTCT CATTCTGGTC CTGGTGATAT TCGGCGGCAT GGGTTCCATC
CCGGGAGCCA TCGTCGGGGC GGCCATCATC CAATGGTTCC CCAACGGCCT CAAAACGTAC
GTGCGCAAAG AGGACCTCTT CCTTTACCTT GGCGCACTGC TTGTCGTCAT GATGATTTAC
CGCCCGCAAG GCCTCATCCC GTCGCGTCGC CGGGCGCGCG AACTGGCGCT GGCCGAGAGC
GGACTGGTGG AAGCCGACGC ACTCACGACT GCGAGCAGGG ACGTCTGA
 
Protein sequence
MTLRRVWAWA TSLRGRQLWV TLAGALVVDV MTGPSGSLND PTAGFAGSLL SRRVGIFLLI 
GFAFWLLVTS RERLAAWSRS WTAAVRPSRW LPSRWYRLAA YGVLLAVAIV LPLVLSPYWQ
EVAVDQIGVY VLLALGLNVV VGLAGLLDLG YIAFYAIGAY SCAYWTDSLP IHPPFVLNPF
ATIPFAIAAA MLAGVILGAP TLRLRGDYLA IVTLGFGEII TIYATNLQSV TGGSPGNSRP
IPHFSINLFG LHYRWGIDNM PYYYLLLAFV VMVIVFFHNL ENSRVGRAWT AIREDEVAAA
ASGVNTFRYK LLAFAIGAST SGFAGVLFAS KIQTITPLSF LLQQSILILV LVIFGGMGSI
PGAIVGAAII QWFPNGLKTY VRKEDLFLYL GALLVVMMIY RPQGLIPSRR RARELALAES
GLVEADALTT ASRDV