Gene Acel_1067 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1067 
Symbol 
ID4485315 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand+ 
Start bp1176973 
End bp1177593 
Gene Length621 bp 
Protein Length206 aa 
Translation table11 
GC content63% 
IMG OID639729841 
ProductGPR1/FUN34/yaaH family protein 
Protein accessionYP_872825 
Protein GI117928274 
COG category[S] Function unknown 
COG ID[COG1584] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.00312411 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value0.445935 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGCGC CGGCAGACCC GGCACCGCTT GGTCTCGCCG GTTTCGCACT CACAACATTC 
CTGCTCTCGG CAAAGAACGC GGGTTGGACG CACGGCACGG ATGCCTGGCT CGGCTACGCA 
TTCGCGTACG GCGGTCTCGT CCAGTTGCTC GCCGGCATGT GGGAATTCCG CAACCGTAAT 
GTTTTCGGTG CCACGGCATT TTCGACATAC GGCGGCTTCT GGATCGGCCT CGGCCTTTAC 
GTCAAGCTTG TCGCGCCCAC CGCGCAGAAT GGCTCGCAGG TCAGTAATGA CCTCGCGTGG 
ATTCTCCTTG CGTTTCTGAT TTTCAACAGC TACATGCTGC TCTGGAGCCT GTGGACGAAC 
TGGGCGGTAT TCGGGGTGTT CCTCACCTTG GAGGTGACCG AGCTCGTGCT GGTCATCGGG 
AACTTCAACG AGAACAGCAA TGCCGTCAAG GCCGGTGGAG TGATCGGCGT CATCACCGCC 
GCGGTGGCGT GGTACACCTC GGCTGCCGGC GTTATCAACG GCATGGTGGG CCGTTCTCTG 
CTGCCGGTTG GATCGCCGCC GGCCGGGAAT GTGGGTCGGG CGGCACCGGC TGTCACTCCG 
CAACCGGTTC CGCAACGCTA G
 
Protein sequence
MPAPADPAPL GLAGFALTTF LLSAKNAGWT HGTDAWLGYA FAYGGLVQLL AGMWEFRNRN 
VFGATAFSTY GGFWIGLGLY VKLVAPTAQN GSQVSNDLAW ILLAFLIFNS YMLLWSLWTN 
WAVFGVFLTL EVTELVLVIG NFNENSNAVK AGGVIGVITA AVAWYTSAAG VINGMVGRSL 
LPVGSPPAGN VGRAAPAVTP QPVPQR