Gene Acel_1065 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1065 
Symbol 
ID4484847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1174661 
End bp1175410 
Gene Length750 bp 
Protein Length249 aa 
Translation table11 
GC content69% 
IMG OID639729840 
Productresponse regulator receiver protein 
Protein accessionYP_872824 
Protein GI117928273 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG3279] Response regulator of the LytR/AlgR family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.251377 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value0.725191 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCACGC AGCTGTCCGT TCTCGCAGTG GACGACGAAC CGCCGGCGCT CGACGAGTTG 
GTGTATTCGC TGCGGCAGTG CCCCGCGGTC GGCACAATTT ACGCCGCCCA CGATGCGGCG
GAGGCGTTGC GATGCCTCGA ACACGACGAC GTGGACGTCG TGTTCCTCGA CGTCGTCATG
CCCGGCCTGG ACGGCCTCGA ACTCGCCGGT GTGCTCAACC GGTTCGCCCG GGCGCCCGCG
GTTGTGTTCG TCACGGCCCA CGAGAAATAT GCGGTCGCCG CCTTCGGCGT CCAGGCCGTC
GACTACGTTC TCAAACCGTT CGATGTCCAC CGGCTGTCGG CCGCACTGGC CAGGGTCACC
GGCCGCACGT CGACCGCCAA TCGCGACAGC GGCGAGCAGT TCGCCACCCT GGCCGCTGAT
CTCCCAGGCC GGACCGTGCT CATCGACCGA TCGGAGGTCG AGTGGGTGGA GGCGGCCGGC
GACTACGTTC GGGTGCACAC TCATGATGGG CACAGCTACC TCGTGCGAGT GCCGCTCGCT
GTCCTCGCCG AGCGCTGGGA ACCGCACGGT TTCGCACGCA TTCACCGCAG CCATCTGGTG
GCGCTGCGCG CGGTCCGGGA GATCGCTACC CGCGACGGTC AGACCAGCGT GCTCGTCGGC
GGCCACCACC TGCCGGTGAG CCGCCGTCAC CTCCGAGACT TCCGGGAACG GCTGTTCCAC
GGCCGCGCAC CCCGGGAGGA GGCGCCGTGA
 
Protein sequence
MTTQLSVLAV DDEPPALDEL VYSLRQCPAV GTIYAAHDAA EALRCLEHDD VDVVFLDVVM 
PGLDGLELAG VLNRFARAPA VVFVTAHEKY AVAAFGVQAV DYVLKPFDVH RLSAALARVT
GRTSTANRDS GEQFATLAAD LPGRTVLIDR SEVEWVEAAG DYVRVHTHDG HSYLVRVPLA
VLAERWEPHG FARIHRSHLV ALRAVREIAT RDGQTSVLVG GHHLPVSRRH LRDFRERLFH
GRAPREEAP