Gene Acel_1025 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_1025 
Symbol 
ID4484566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1130540 
End bp1131514 
Gene Length975 bp 
Protein Length324 aa 
Translation table11 
GC content67% 
IMG OID639729800 
Producthypothetical protein 
Protein accessionYP_872784 
Protein GI117928233 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.995963 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00250254 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGGTCAACA ACGACGACAC GCCGGCACCG GGTGGCGCAG CGCCATCTCC CGGAGGCCTG 
ACACCGCCGG CCCACGGTAC CGGACACGCG ACGGGCGCCG CGTCGTCCGC CGAACCGACA
ACCTCGGCAC CGCAGCCGCG GCCCGGCACA CCACCACCGA CAGCCCAGGG ATACACTCCG
CCGGCCGGCC CGGCCCGCAC ATCGTGGTTC GCCCGGCACA AGATTCTCAC CGGGCTGGGC
GTTCTGATCG TGCTCATTGT CGTGATCGCC GTTGCGACGT CGCATCCGAC GCCGAGCAAG
ACGAATGCTG CGACGTCAGG TGCGGCGCAG AGCACAGCAG CCGCATCGTC CGGGCTGGTG
ACGACGGCCG CGACGGGCTC CACGCCGGAG TCCGCGGCAG CGACCGAGGC GTCTACCGAG
CCGGCAACCC CGGCACAGAC GCCGATCGCG TCGCCGCGCA GCTACTCGGG GCAGGGCGAT
TCCGTCGTCC ACATCACCAA ACCGGTGAGC GGCCCGGTGC TGCTCACGGC CACGTACCAA
GGCGGCGCGA ACAACTTTGT GGTTGAAGCG CTCGGGCCGG ATCTCAGCAG CACCGACGTC
CTCATCAATA CGATCGGCGC CTACCACGGC ACCGTGCTCC TCGACGGGCC GAACTCGTTC
TCGCAGGACA CGACCGCCCT CAAGGTGACA GCGACCGGCC CGTGGTCCAT CACACTGGCC
GATCCCCGAA CGGCACGGAA CTTCGACACC ACGATTTCCG GCAAGGGCGA CGAGGTTGTC
AACTACACCG GTGGACCAGC CGCCTTCCTG ATCACAAATC AGGGCCAGGA CAACTTCGTC
GTGACCGCAC TTGGTGGCGA CTTCCCTGAC CTGTTGGTCA ACACCATCGG GAACTATCAC
GGTACCGTGC CGATCTCGGC TTCGGGGCTC GTGCAGATCG AATCGGATGG TTCCTGGACG
ATGACCAAGC AGTAG
 
Protein sequence
MVNNDDTPAP GGAAPSPGGL TPPAHGTGHA TGAASSAEPT TSAPQPRPGT PPPTAQGYTP 
PAGPARTSWF ARHKILTGLG VLIVLIVVIA VATSHPTPSK TNAATSGAAQ STAAASSGLV
TTAATGSTPE SAAATEASTE PATPAQTPIA SPRSYSGQGD SVVHITKPVS GPVLLTATYQ
GGANNFVVEA LGPDLSSTDV LINTIGAYHG TVLLDGPNSF SQDTTALKVT ATGPWSITLA
DPRTARNFDT TISGKGDEVV NYTGGPAAFL ITNQGQDNFV VTALGGDFPD LLVNTIGNYH
GTVPISASGL VQIESDGSWT MTKQ