Gene Acel_0973 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0973 
Symbol 
ID4485389 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1071852 
End bp1072502 
Gene Length651 bp 
Protein Length216 aa 
Translation table11 
GC content69% 
IMG OID639729748 
Producttwo component LuxR family transcriptional regulator 
Protein accessionYP_872732 
Protein GI117928181 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.255067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value0.404517 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAGCTG AGCAGCCGAC GACCGTACTT CTCGTCGACG ATCACGATCT GATCCGGCAG 
GGCCTGCGCC GCGCCTTCGA ACGAGCCGGA GATTTCACAG TGGTCGGTGA GGCCGGCAGT
GTCGCCGAAG CCCTCGCATG CGCGACGCGG CATCAGCCGG ACGTCGTTGT GATCGACGTC
CGGCTGCCGG ATGGCAGCGG CCTGGACGTG GCGCGCGAAC TCCGCCGGCA GCGCCCGGAC
GTCGGGATCG TGGTGCTCAC CATGTACGCC GGCGACGAAC AGCTCTTCGG AGCACTCGAG
GCAGGGGCAT CTGCGTTCGT CGCGAAGGAT GCGCCCGCCG AGGACGTGGT GAGCGCGGCC
CGGCACGCGC TTGTCTCGCC GAGGTCGTTC TCCGCCGCTG ACCTTGCCGG TGCCATGCGC
CGTCGCATGA ACCCGTCCGG TCCGCAGTTG ACCCCTCGGG AACGGGAGGT CCTGCAGCTG
ATGGCCGACG GCCTTGGCGT CAGCGCCATC GCCCGGCAGC TGTTCATCAG CGAGTCGACG
ACCAAGACCC ACGTGTCGAA GCTGTACGAG AAGTTGGGGG CGGCGAATCG CGCCCAGGCG
CTCATGGCGG CCATCCGCCT GGGGCTGTTG GAACCGGACG ACGTGAGCTA G
 
Protein sequence
MAAEQPTTVL LVDDHDLIRQ GLRRAFERAG DFTVVGEAGS VAEALACATR HQPDVVVIDV 
RLPDGSGLDV ARELRRQRPD VGIVVLTMYA GDEQLFGALE AGASAFVAKD APAEDVVSAA
RHALVSPRSF SAADLAGAMR RRMNPSGPQL TPREREVLQL MADGLGVSAI ARQLFISEST
TKTHVSKLYE KLGAANRAQA LMAAIRLGLL EPDDVS