Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_0973 |
Symbol | |
ID | 4485389 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | - |
Start bp | 1071852 |
End bp | 1072502 |
Gene Length | 651 bp |
Protein Length | 216 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 639729748 |
Product | two component LuxR family transcriptional regulator |
Protein accession | YP_872732 |
Protein GI | 117928181 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG2197] Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.255067 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 0.404517 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGCAGCTG AGCAGCCGAC GACCGTACTT CTCGTCGACG ATCACGATCT GATCCGGCAG GGCCTGCGCC GCGCCTTCGA ACGAGCCGGA GATTTCACAG TGGTCGGTGA GGCCGGCAGT GTCGCCGAAG CCCTCGCATG CGCGACGCGG CATCAGCCGG ACGTCGTTGT GATCGACGTC CGGCTGCCGG ATGGCAGCGG CCTGGACGTG GCGCGCGAAC TCCGCCGGCA GCGCCCGGAC GTCGGGATCG TGGTGCTCAC CATGTACGCC GGCGACGAAC AGCTCTTCGG AGCACTCGAG GCAGGGGCAT CTGCGTTCGT CGCGAAGGAT GCGCCCGCCG AGGACGTGGT GAGCGCGGCC CGGCACGCGC TTGTCTCGCC GAGGTCGTTC TCCGCCGCTG ACCTTGCCGG TGCCATGCGC CGTCGCATGA ACCCGTCCGG TCCGCAGTTG ACCCCTCGGG AACGGGAGGT CCTGCAGCTG ATGGCCGACG GCCTTGGCGT CAGCGCCATC GCCCGGCAGC TGTTCATCAG CGAGTCGACG ACCAAGACCC ACGTGTCGAA GCTGTACGAG AAGTTGGGGG CGGCGAATCG CGCCCAGGCG CTCATGGCGG CCATCCGCCT GGGGCTGTTG GAACCGGACG ACGTGAGCTA G
|
Protein sequence | MAAEQPTTVL LVDDHDLIRQ GLRRAFERAG DFTVVGEAGS VAEALACATR HQPDVVVIDV RLPDGSGLDV ARELRRQRPD VGIVVLTMYA GDEQLFGALE AGASAFVAKD APAEDVVSAA RHALVSPRSF SAADLAGAMR RRMNPSGPQL TPREREVLQL MADGLGVSAI ARQLFISEST TKTHVSKLYE KLGAANRAQA LMAAIRLGLL EPDDVS
|
| |