Gene Acel_0971 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0971 
Symbol 
ID4485387 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp1069323 
End bp1070360 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content71% 
IMG OID639729746 
ProductNLP/P60 protein 
Protein accessionYP_872730 
Protein GI117928179 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0791] Cell wall-associated hydrolases (invasion-associated proteins) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.230256 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCCTT CCCTCCTGCG GCCGACGCTT GCCGGCTTGG CGGTCGTTCT CGGCGTGTCG 
CTCTCCGTCG GCAGCGCCTC CGCCGATCCG CAGAGCACGG CGGCCGATGC GCAGACCAGA
CTTGCCAGCC TCGCTGACCA GGCCGAACTG CTCATCGAGC AATACAACGC AGCTAATGAT
CGGCTGCAAG CCGCCGAGCG GCGCGTGCAG TCGTCGCAGT CGGCGGTGAG CCGCGCCGAA
CAGCAGGTCG CCGCGGCGCG GACGACAGTC GCCGGCCTTG CGGTCGTTGC GTACCAGGCA
GGGGACACCG GCGTCCTCGA AGCGCTCCTC GTCAGCGGCG ATCCGCAGCT CGCCCTCAGC
CGCGTGCAGA CCCTCACCCT TCTCCTCAGC CAAAGGCAGT CCGCCTTGCG TGACCTGCAG
GCCGCGCAGG TCCACCTCAC CCAGCTGCGC CGGCAGGCCG CCCAGGACGT CGCCGCCATC
GCGGCGTTAC GAGACTCCCT CGCGGCTCAG CGCAGTCGGA TCGAAAAGCT CGTGGCCCGT
CAGCAGGCGC TGGTCGCCGC GCAGCAGGCC GCCGCCAGGC AGCAGGCCGC TGCGCAGGCC
GCAGCGGAAG CCCGGGCCCG GGCGGCTCAG CAGCAGGTCA CCCGGTCCGC GCCGCGGGTT
GCGCTCGACC TGCCCGCGCC GGCGGGTGCG GGAGCGGCGG CGATCGCCGT CCGGTATGCG
TACGCCCAGC TCGGCAAGCC GTACCGCTGG GGTGGCGCCG GCCCGTCGTC GTTCGACTGC
TCCGGGCTGA CCATGCGTGC CTGGGAGGCG GCGGGCGTCT CGCTGCCTCA CAACGCGGCG
GCGCAGTACG CCGTGACGCC GCACGTGTCG TTGTCCGCGC TGCAACCGGG CGATCTGATC
TTCTTCGGGC ATCCGATCCA CCACGTCGGC ATCTACATCG GCAACGGCGA GATGATCGAA
GCTCCGTACA CCGGCACGAC CGTGCGCATC ACCAACTTCG GGTATCGCCA TGACATCGTC
GGCGCTTCCC GCCCGTAG
 
Protein sequence
MAPSLLRPTL AGLAVVLGVS LSVGSASADP QSTAADAQTR LASLADQAEL LIEQYNAAND 
RLQAAERRVQ SSQSAVSRAE QQVAAARTTV AGLAVVAYQA GDTGVLEALL VSGDPQLALS
RVQTLTLLLS QRQSALRDLQ AAQVHLTQLR RQAAQDVAAI AALRDSLAAQ RSRIEKLVAR
QQALVAAQQA AARQQAAAQA AAEARARAAQ QQVTRSAPRV ALDLPAPAGA GAAAIAVRYA
YAQLGKPYRW GGAGPSSFDC SGLTMRAWEA AGVSLPHNAA AQYAVTPHVS LSALQPGDLI
FFGHPIHHVG IYIGNGEMIE APYTGTTVRI TNFGYRHDIV GASRP