Gene Acel_0629 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0629 
Symbol 
ID4485535 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp680814 
End bp682316 
Gene Length1503 bp 
Protein Length500 aa 
Translation table11 
GC content70% 
IMG OID639729397 
Productdiaminopimelate decarboxylase 
Protein accessionYP_872388 
Protein GI117927837 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0019] Diaminopimelate decarboxylase 
TIGRFAM ID[TIGR01048] diaminopimelate decarboxylase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.0587531 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000745702 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCGCGCCC ACGAAGCCGG TGCCCTGCAC GCAGAAGTCG CCGAACCGCC CGCGCTCCCG 
CTGCGGCCGC CGGCGGACCT CGACTCTCTC GCCCCGCACG TGTGGCCGGC AACCGCGCGC
CGCGGGCCGG ACGGCGAAAT CCGCGTCGGC GGCGTTGACC TGCGCGCGGT GGCCGCCGAA
TTCGGCACGC CGTGCTATGT CATCGACGAG ACGGATTTCC GGTCCCGCTG CCGGCGTTGG
CGGACCGCCT TCGAGGGCGC CACGGTGTAC TACGCCGCCA AGGCGTTGCT CACGCTCGGC
ATCGCCCGGT GGGTGGCTGA CGAGCAGCTC GGTCTCGACG TCTGCACCGG TGACGAATTG
GCGGTGGCGC TGCGGGCCGG CGTGGATCCG GCGCGGATCG TCTTCCACGG CAACAACAAG
TCGGACGCCG AATTGCGGAC CGCGCTGCAG GCCGGTGTCG GGCGGATCGT CATCGACGCG
TTCGCCGAAC TCCGCCGCCT TGCCGCGCTC GGGGCCGAAC TCGGTGTCCG GCCGGATGTC
CTCATCCGCG TCACGGTCGG CGTCGAAGCG CACACGCACG AGTTCATCGC GACTGCGCAT
GAAGACCAGA AATTCGGGTT CTCCCTTGCC GGCGGACAGG CCCTTGCGGC TGTCACCGAG
GCGCTGGGCG CGACGAGCCT CCGCCTTGTC GGATTGCATT CGCACATCGG TTCGCAGATT
TTCGACACCG CCGGCTTTGA GGTCGCCGCC CATCGGGTCG TCGGATTGCT CCGCACCATT
CGTGACCAGC ACGGCATCGA ATTGCCGGAA TTGAATCTTG GCGGCGGGGT GGGCGTTGCG
TACACGGCCG ACGACGACCC CGTGGACGTC GCGGAATTTG CCGCGCAGGT GCGGGCCATC
GTCGAACGGG AATGCGCGGC CGCCGGCCTT GCCGTGCCGC GGTTGGCCGT TGAGCCGGGA
CGGGCGATCG CCGGCCCGCC GGTGCTCACC GTGTACCGGG TCGGCACCGT CAAACCCGTC
GATCTCGGCG GGGGATTCGT TCGCACGTAC GTCTCGGTGG ACGGCGGAAT GAGCGACAAC
ATTCGCGCCG CCCTCTATGA CGCGGCGTAC ACCTGCGCGC TCGCCAATCG CCGAGCGGCC
GGCGAACCGA TTCTCGCCCG GGTCGTCGGC AAGCACTGCG AGGCGGGTGA CATCGTCGTC
CGCGACACCT TCGTGTCCGC CGACATTCAG GACGGCGACC TGCTCGCCGT CCCGGTCACC
GGCGCATACT GCCGTTCGCT GGCGAGCAAC TACAACTACC TGGGCCGTCC GCCGCTGGTC
GCGGTCCGCG ACGGCAGAGC CCGCCTGCTC GTCCGCCGGG AGACCATCGA CGACCTGCTC
CGCCTCGACC TTGGGGACGA TCTCAACCGC GGCGAATGCA CGGCAAGCGA AGATACGCCG
CCCGACACCC GAACACACGA CCGTGCCGGA GTGCGAAGCG GCGCAGCCGA ACCGGCAGAA
TGA
 
Protein sequence
MRAHEAGALH AEVAEPPALP LRPPADLDSL APHVWPATAR RGPDGEIRVG GVDLRAVAAE 
FGTPCYVIDE TDFRSRCRRW RTAFEGATVY YAAKALLTLG IARWVADEQL GLDVCTGDEL
AVALRAGVDP ARIVFHGNNK SDAELRTALQ AGVGRIVIDA FAELRRLAAL GAELGVRPDV
LIRVTVGVEA HTHEFIATAH EDQKFGFSLA GGQALAAVTE ALGATSLRLV GLHSHIGSQI
FDTAGFEVAA HRVVGLLRTI RDQHGIELPE LNLGGGVGVA YTADDDPVDV AEFAAQVRAI
VERECAAAGL AVPRLAVEPG RAIAGPPVLT VYRVGTVKPV DLGGGFVRTY VSVDGGMSDN
IRAALYDAAY TCALANRRAA GEPILARVVG KHCEAGDIVV RDTFVSADIQ DGDLLAVPVT
GAYCRSLASN YNYLGRPPLV AVRDGRARLL VRRETIDDLL RLDLGDDLNR GECTASEDTP
PDTRTHDRAG VRSGAAEPAE