Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_0629 |
Symbol | |
ID | 4485535 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 680814 |
End bp | 682316 |
Gene Length | 1503 bp |
Protein Length | 500 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 639729397 |
Product | diaminopimelate decarboxylase |
Protein accession | YP_872388 |
Protein GI | 117927837 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0019] Diaminopimelate decarboxylase |
TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0587531 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000745702 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCGCGCCC ACGAAGCCGG TGCCCTGCAC GCAGAAGTCG CCGAACCGCC CGCGCTCCCG CTGCGGCCGC CGGCGGACCT CGACTCTCTC GCCCCGCACG TGTGGCCGGC AACCGCGCGC CGCGGGCCGG ACGGCGAAAT CCGCGTCGGC GGCGTTGACC TGCGCGCGGT GGCCGCCGAA TTCGGCACGC CGTGCTATGT CATCGACGAG ACGGATTTCC GGTCCCGCTG CCGGCGTTGG CGGACCGCCT TCGAGGGCGC CACGGTGTAC TACGCCGCCA AGGCGTTGCT CACGCTCGGC ATCGCCCGGT GGGTGGCTGA CGAGCAGCTC GGTCTCGACG TCTGCACCGG TGACGAATTG GCGGTGGCGC TGCGGGCCGG CGTGGATCCG GCGCGGATCG TCTTCCACGG CAACAACAAG TCGGACGCCG AATTGCGGAC CGCGCTGCAG GCCGGTGTCG GGCGGATCGT CATCGACGCG TTCGCCGAAC TCCGCCGCCT TGCCGCGCTC GGGGCCGAAC TCGGTGTCCG GCCGGATGTC CTCATCCGCG TCACGGTCGG CGTCGAAGCG CACACGCACG AGTTCATCGC GACTGCGCAT GAAGACCAGA AATTCGGGTT CTCCCTTGCC GGCGGACAGG CCCTTGCGGC TGTCACCGAG GCGCTGGGCG CGACGAGCCT CCGCCTTGTC GGATTGCATT CGCACATCGG TTCGCAGATT TTCGACACCG CCGGCTTTGA GGTCGCCGCC CATCGGGTCG TCGGATTGCT CCGCACCATT CGTGACCAGC ACGGCATCGA ATTGCCGGAA TTGAATCTTG GCGGCGGGGT GGGCGTTGCG TACACGGCCG ACGACGACCC CGTGGACGTC GCGGAATTTG CCGCGCAGGT GCGGGCCATC GTCGAACGGG AATGCGCGGC CGCCGGCCTT GCCGTGCCGC GGTTGGCCGT TGAGCCGGGA CGGGCGATCG CCGGCCCGCC GGTGCTCACC GTGTACCGGG TCGGCACCGT CAAACCCGTC GATCTCGGCG GGGGATTCGT TCGCACGTAC GTCTCGGTGG ACGGCGGAAT GAGCGACAAC ATTCGCGCCG CCCTCTATGA CGCGGCGTAC ACCTGCGCGC TCGCCAATCG CCGAGCGGCC GGCGAACCGA TTCTCGCCCG GGTCGTCGGC AAGCACTGCG AGGCGGGTGA CATCGTCGTC CGCGACACCT TCGTGTCCGC CGACATTCAG GACGGCGACC TGCTCGCCGT CCCGGTCACC GGCGCATACT GCCGTTCGCT GGCGAGCAAC TACAACTACC TGGGCCGTCC GCCGCTGGTC GCGGTCCGCG ACGGCAGAGC CCGCCTGCTC GTCCGCCGGG AGACCATCGA CGACCTGCTC CGCCTCGACC TTGGGGACGA TCTCAACCGC GGCGAATGCA CGGCAAGCGA AGATACGCCG CCCGACACCC GAACACACGA CCGTGCCGGA GTGCGAAGCG GCGCAGCCGA ACCGGCAGAA TGA
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Protein sequence | MRAHEAGALH AEVAEPPALP LRPPADLDSL APHVWPATAR RGPDGEIRVG GVDLRAVAAE FGTPCYVIDE TDFRSRCRRW RTAFEGATVY YAAKALLTLG IARWVADEQL GLDVCTGDEL AVALRAGVDP ARIVFHGNNK SDAELRTALQ AGVGRIVIDA FAELRRLAAL GAELGVRPDV LIRVTVGVEA HTHEFIATAH EDQKFGFSLA GGQALAAVTE ALGATSLRLV GLHSHIGSQI FDTAGFEVAA HRVVGLLRTI RDQHGIELPE LNLGGGVGVA YTADDDPVDV AEFAAQVRAI VERECAAAGL AVPRLAVEPG RAIAGPPVLT VYRVGTVKPV DLGGGFVRTY VSVDGGMSDN IRAALYDAAY TCALANRRAA GEPILARVVG KHCEAGDIVV RDTFVSADIQ DGDLLAVPVT GAYCRSLASN YNYLGRPPLV AVRDGRARLL VRRETIDDLL RLDLGDDLNR GECTASEDTP PDTRTHDRAG VRSGAAEPAE
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