Gene Acel_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0625 
Symbol 
ID4485530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp675868 
End bp676275 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content69% 
IMG OID639729392 
Productcupin 2 domain-containing protein 
Protein accessionYP_872384 
Protein GI117927833 
COG category[S] Function unknown 
COG ID[COG1917] Uncharacterized conserved protein, contains double-stranded beta-helix domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.285367 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.00129861 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGACCGGAC CAGCGCACCC ACCGACGAGC AAGGGTCCCG CGGAAACATT CACCGGCGAC 
GTCTACGTCG ACACGATCGC GCGCGGTGAG GGGCCGTCGC GGCTGCGGGT CAGTGTCGTG
CGCTTCACCC CGTCCGCCCG CACGGCCTGG CACCGCCATC CGGTCGGCCA GACGTTGTAT
GTCCTAGAGG GCAAGGGCTG GGTGCAGACC CGCGGCGAAG CCGTCACGGA AATGCGCGCC
GGGGACGTCG TCTACACACC GCCGGATCAC TGGCACTGGC ATGGGGCGAC GCCGGAGAAC
TTCATGAGCC ACCTGTCGAT CACCGAGGTC CCCGGTGACG GCAGGGCGGA GGTCGAGTGG
GCGGACCACG TCACCGACGA GGAGTATCTG GCTCCCCGGC GGTCATAG
 
Protein sequence
MTGPAHPPTS KGPAETFTGD VYVDTIARGE GPSRLRVSVV RFTPSARTAW HRHPVGQTLY 
VLEGKGWVQT RGEAVTEMRA GDVVYTPPDH WHWHGATPEN FMSHLSITEV PGDGRAEVEW
ADHVTDEEYL APRRS