| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Acel_0564 |
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| Symbol | |
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| ID | 4485228 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidothermus cellulolyticus 11B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008578 |
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| Strand | - |
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| Start bp | 595878 |
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| End bp | 596741 |
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| Gene Length | 864 bp |
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| Protein Length | 287 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 639729331 |
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| Product | RNA polymerase, sigma 28 subunit |
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| Protein accession | YP_872323 |
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| Protein GI | 117927772 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family
[TIGR02980] RNA polymerase sigma-70 factor, sigma-B/F/G subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.244424 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 30 |
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| Fosmid unclonability p-value | 0.87971 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACGAGCG GTCACCACGC GCCGGTTGAT CAACAGATCG AGCCGCTCGA CGATGCGCCG
GCCGCACTGG ACGCGCCTCA GGGTGAGACG CCGTCGTCCG CTATCGTCAC CGACCGGGAG
CGCACCCGCG CCTTGTTCGC CGAAATGGCC GCGCTGCCGC CGGAATCCCC ACGGCGGCAA
GAAATCCGCT CCGAGCTGGT CCAAACCCAC CTGCCTCTCG TCGAATACTT GGCTCGGCGG
TTTCGCAATC GCGGGGAACC GCACGACGAT CTCGTACAGG TGGCGACCAT CGGCCTCATC
AAGGCGATCG ACCGTTTCGA CGTCGAGCGG GGTGTTGAAT TCTCCACCTA CGCGACACCC
ACCATCGTCG GCGAGATCAA ACGCTACTTC CGGGACAGAG GCTGGGCGAT CCGGGTTCCG
CGCCGCCTGC AGGAACTCAA AATGTCACTG GCGAAAGCGA CCAGCGAACT GTCCCAGCAG
TACGGCCGCG CCCCCACGGT CAGCGAGCTT GCCGACCATC TCGGCATGTC TGAGGACGAA
ATCCTGGAGG GTCTGGAATC CGCGAACGCC TACTCCACCA TTTCGCTGGA CACCCCGGAG
ACGGACGACG CCGACGCGCT CGCCGTCGCG GATACGCTGG GAAATATCGA CGAGGCGCTC
GAAGGCGTCG AATACCGCGA ATCGCTCAAG CCGTTACTGG AGAAACTGCC ACCGCGGGAA
AAGCGCATCC TCCTCCTCCG CTTCTTCCGC AACATGACGC AATCGCAGAT CGCGGCCGAA
CTCGGAATTT CTCAGATGCA CGTGTCCCGA CTGCTGGCCC GCACGCTCGC CCGCTTACGC
GAAGGTCTGC TCGCCGACCA ATGA
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| Protein sequence | MTSGHHAPVD QQIEPLDDAP AALDAPQGET PSSAIVTDRE RTRALFAEMA ALPPESPRRQ
EIRSELVQTH LPLVEYLARR FRNRGEPHDD LVQVATIGLI KAIDRFDVER GVEFSTYATP
TIVGEIKRYF RDRGWAIRVP RRLQELKMSL AKATSELSQQ YGRAPTVSEL ADHLGMSEDE
ILEGLESANA YSTISLDTPE TDDADALAVA DTLGNIDEAL EGVEYRESLK PLLEKLPPRE
KRILLLRFFR NMTQSQIAAE LGISQMHVSR LLARTLARLR EGLLADQ
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