Gene Acel_0416 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0416 
Symbol 
ID4485974 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp434500 
End bp435381 
Gene Length882 bp 
Protein Length293 aa 
Translation table11 
GC content72% 
IMG OID639729183 
ProductdTDP-4-dehydrorhamnose reductase 
Protein accessionYP_872176 
Protein GI117927625 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1091] dTDP-4-dehydrorhamnose reductase 
TIGRFAM ID[TIGR01214] dTDP-4-dehydrorhamnose reductase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.128844 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGCGTT GGCTGGTCAC CGGCGCCGGC GGTCAACTGG GCAGTGATCT CGTCGATCTG 
CTCCAGCGTT CCGGGGCGGA GGTCGTCGGT CTGGCCCGCG CCGAGCTGGA CATCACCGAC
GCCGACGCCG TGCTCGCCGC GTGCGAGCGG TTCCACCCGG ACGTCGTCAT CAACGCCGCC
GCCTACACCG CGGTGGACGC CGCTGAATCC GATCCCGCCA CGGCCTTTGC CGTGAACGCC
GAGGGTGCCG GTCACGTCGC CGCCGCGACG GCCAAGCTGG GTGCCCGGCT CGTGCACGTC
TCCACCGACT ACGTCTTCGC CGGGGACGCG ACCTCGCCGT ACGACGAGGA GGCGCCGGTT
GCGCCGCGGA GCGTGTACGG CCGGAGCAAG GCGGCGGGCG AGCGTGCCGT CCTGGAGGCG
CATCCAGGCG CTTACGTCGT GCGGACCGCC TGGGTGTACG GAGCAGTGGG GCAGAACTTC
GTCAAGACCA TGGCCCGGCT GGAGCGGGAG AAGGAGACCG TCACTGTCGT CGATGATCAA
CGCGGTTCGC CGACCTGGTC CCGGGACCTT GCTGATGCGC TGATCACTCT GGCCCGGTCG
GATGCGCCGC CCGGGGTGTA CCACTGCACG AACGCCGGCG AGACGACCTG GTTCGGCTTC
GCTCGAGCGA TCTTTGAGGA GCTTGGCGCC GACCCGACCC GCGTCCGGCC GACCACGACC
GCGGCGTTTC CGCGGCCGGC GCCGCGTCCC GCCTACTCCG TCCTGGGGCA CCGCCGGTGG
CAGCAGGCCG GCTTGCCGGC GATGCGGCCG TGGCGGGACG CACTCCGCGC GGCGTTCGCC
TTCTGCGGCC CGGCGTTGCG CGGTGATCCG ACCGGGGCCT AG
 
Protein sequence
MTRWLVTGAG GQLGSDLVDL LQRSGAEVVG LARAELDITD ADAVLAACER FHPDVVINAA 
AYTAVDAAES DPATAFAVNA EGAGHVAAAT AKLGARLVHV STDYVFAGDA TSPYDEEAPV
APRSVYGRSK AAGERAVLEA HPGAYVVRTA WVYGAVGQNF VKTMARLERE KETVTVVDDQ
RGSPTWSRDL ADALITLARS DAPPGVYHCT NAGETTWFGF ARAIFEELGA DPTRVRPTTT
AAFPRPAPRP AYSVLGHRRW QQAGLPAMRP WRDALRAAFA FCGPALRGDP TGA