Gene Acel_0372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0372 
Symbol 
ID4485783 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp384509 
End bp385678 
Gene Length1170 bp 
Protein Length389 aa 
Translation table11 
GC content63% 
IMG OID639729139 
Productendo-1,4-beta-xylanase 
Protein accessionYP_872132 
Protein GI117927581 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG3693] Beta-1,4-xylanase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones39 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGAATGC GCTCGATGAC GGCAGCGGCG CTGGGCGCTG CCATGGTCGT CGCGACGGCC 
ACCACGGCTT TCGCGCACGG CAATCCGCCG TACCACCCGC CGGCCGATTC GCTCCGCGCG
CTGGCTGCGA AGATAGGCCT CCGCGTCGGT ACCGCCATCA TTCCGTACGA CCTCGACCAT
CCGGATTACG CGGCAATCGC CGCCAGTCAA TTCTCGGTCG TCACCCCAGG CAACGAAATG
AAGTGGCAGG TCGTTGAACC GACCCAAGGT ACGTACGATT GGTCCGGCGG CGATCGGCTC
GTGCAATTCG CGCAAGAACA CGGACAGCTC GTCCGCGGCC ACACGCTCGT CTGGCACAAC
CAGCTCCCCG ACTGGCTGGT CCAGGGCGTC AACAACGGTA CGATTTCCAA CGCGCAATTG
CGGGACCTGC TGCACAAGCA CATCGTGGAC GAAGTCACCC ATTTCAAAGG AAAGATCTGG
CAATGGGACG TCGCGAATGA ATTCTTCGCC AACTCCTGGG ACCCGCATCC ACTCCCCGAC
GGCATCAACG GAGACGATTT CTGGGTGCAG CATCTCGGTG AGGGAATCAT CGCCGACGCC
TTCCGCTGGG CGCACCAGGC CGATCCGCAC GCGCTGTTGT TCTACAACGA CTACAACATC
GCCGGCGAAG ACGGCACGAA CGCCAAGGCC GACGCGGTGT ACAACTGGGT GAAGAAGATG
CTCGCCGAGG GTGTGCCGAT CAACGGCATC GGTGACCAGG GTCACCTGGA CACCCAGTAC
GGCTTCCCGA CAAAGATGCA GGAGGACTTG CAGCGGTACG CCGACTTGGG TCTGAAGGTG
GCGATCACCG AAGCGGATGT CCGCACCTTT GTCACGGACG CGACAACGCA GCAACCGACC
GACCCGCTCG CGCCGTACGC GCAGGCGAAC TACTACGACG GGATGCTCAA GGCCTGCCTC
GCCGTCAAGA ACTGCATCTC CTACACGGTC TGGGGATTCG GGGACGCGGA TTCGTGGATT
CCCGGATTCT TCTCCGGCGA AGGGTACGCA AATCTGTACG ACGTGAACCT GCAGCCGAAG
CCGGCGTACA CGGCCTTGCA GCAGACCCTT GCGCTCGCAG CCGGCGCGCC GCACCGGGCG
GGATTCGGTC ATCACGCCCT GCGCCGATAA
 
Protein sequence
MRMRSMTAAA LGAAMVVATA TTAFAHGNPP YHPPADSLRA LAAKIGLRVG TAIIPYDLDH 
PDYAAIAASQ FSVVTPGNEM KWQVVEPTQG TYDWSGGDRL VQFAQEHGQL VRGHTLVWHN
QLPDWLVQGV NNGTISNAQL RDLLHKHIVD EVTHFKGKIW QWDVANEFFA NSWDPHPLPD
GINGDDFWVQ HLGEGIIADA FRWAHQADPH ALLFYNDYNI AGEDGTNAKA DAVYNWVKKM
LAEGVPINGI GDQGHLDTQY GFPTKMQEDL QRYADLGLKV AITEADVRTF VTDATTQQPT
DPLAPYAQAN YYDGMLKACL AVKNCISYTV WGFGDADSWI PGFFSGEGYA NLYDVNLQPK
PAYTALQQTL ALAAGAPHRA GFGHHALRR