Gene Acel_0335 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0335 
Symbol 
ID4486403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp346271 
End bp346939 
Gene Length669 bp 
Protein Length222 aa 
Translation table11 
GC content74% 
IMG OID639729102 
Product50S ribosomal protein L17P 
Protein accessionYP_872095 
Protein GI117927544 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0203] Ribosomal protein L17 
TIGRFAM ID[TIGR00059] ribosomal protein L17 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value0.194907 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.000408041 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCCCTCGC CGACCAAGGG AGCCCGCCTC GGTGGCGGCC CGGCTCACGA GCGCCTCATC 
CTCGCGGGTC TGGCCACCGC GTTGTTCGCC CATGGCCGGG TTCGGACGAC GGAGGCAAAG
GCACGCCGCC TCCGGCCACT GGCTGAACGT CTCATCACCA AGGCCAAGCG CGGGGATCTC
CACGCGCGAC GGCAGGTGCT GACCGTGGTC CGCGACAAGA CCGTGGTGCA CCGGCTCTTC
GCGGAAATTG GCCCGCAGTA CCGGAATCGG CCCGGCGGCT ATACCCGGAT TCTCAAGCTC
GGCCCGCGGA AGGGCGACGC AGCACCGATG GCGTTGATCG AATTGGTGGA ACCGGCGGCG
GAAGAAGTCG TCGCCGAGGC CACCGCCGCG ACGCGCCGGT CCGCCCGGGA TCGGGTCGGA
CGGCGAAGCA GGGCCGCGGA GGCGCCGACT GCACCGGCCG AAGTCGCTGC CGGCGGGGCG
GAGCCCGTGG CGGCGGTCGC CGAACCGGTC GGGTCGGCCG CGGGTACCGC CGAGGCGCCG
GCCGCGGCGC CCGACGAAAC GGCCGGGGCG GAGCCTGCGG TGGCGGCCGC CGAGTCACCG
GCGGCTGCAG ACGCTGAGGC CCCTGCCGGC GCTGGTGCCG CTGCAGAGGA GCCGGAAGAG
AAGCCCTGA
 
Protein sequence
MPSPTKGARL GGGPAHERLI LAGLATALFA HGRVRTTEAK ARRLRPLAER LITKAKRGDL 
HARRQVLTVV RDKTVVHRLF AEIGPQYRNR PGGYTRILKL GPRKGDAAPM ALIELVEPAA
EEVVAEATAA TRRSARDRVG RRSRAAEAPT APAEVAAGGA EPVAAVAEPV GSAAGTAEAP
AAAPDETAGA EPAVAAAESP AAADAEAPAG AGAAAEEPEE KP