Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Acel_0335 |
Symbol | |
ID | 4486403 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidothermus cellulolyticus 11B |
Kingdom | Bacteria |
Replicon accession | NC_008578 |
Strand | + |
Start bp | 346271 |
End bp | 346939 |
Gene Length | 669 bp |
Protein Length | 222 aa |
Translation table | 11 |
GC content | 74% |
IMG OID | 639729102 |
Product | 50S ribosomal protein L17P |
Protein accession | YP_872095 |
Protein GI | 117927544 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0203] Ribosomal protein L17 |
TIGRFAM ID | [TIGR00059] ribosomal protein L17 |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.194907 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.000408041 |
Fosmid Hitchhiker | No |
Fosmid clonability | decreased coverage |
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Sequence |
Gene sequence | ATGCCCTCGC CGACCAAGGG AGCCCGCCTC GGTGGCGGCC CGGCTCACGA GCGCCTCATC CTCGCGGGTC TGGCCACCGC GTTGTTCGCC CATGGCCGGG TTCGGACGAC GGAGGCAAAG GCACGCCGCC TCCGGCCACT GGCTGAACGT CTCATCACCA AGGCCAAGCG CGGGGATCTC CACGCGCGAC GGCAGGTGCT GACCGTGGTC CGCGACAAGA CCGTGGTGCA CCGGCTCTTC GCGGAAATTG GCCCGCAGTA CCGGAATCGG CCCGGCGGCT ATACCCGGAT TCTCAAGCTC GGCCCGCGGA AGGGCGACGC AGCACCGATG GCGTTGATCG AATTGGTGGA ACCGGCGGCG GAAGAAGTCG TCGCCGAGGC CACCGCCGCG ACGCGCCGGT CCGCCCGGGA TCGGGTCGGA CGGCGAAGCA GGGCCGCGGA GGCGCCGACT GCACCGGCCG AAGTCGCTGC CGGCGGGGCG GAGCCCGTGG CGGCGGTCGC CGAACCGGTC GGGTCGGCCG CGGGTACCGC CGAGGCGCCG GCCGCGGCGC CCGACGAAAC GGCCGGGGCG GAGCCTGCGG TGGCGGCCGC CGAGTCACCG GCGGCTGCAG ACGCTGAGGC CCCTGCCGGC GCTGGTGCCG CTGCAGAGGA GCCGGAAGAG AAGCCCTGA
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Protein sequence | MPSPTKGARL GGGPAHERLI LAGLATALFA HGRVRTTEAK ARRLRPLAER LITKAKRGDL HARRQVLTVV RDKTVVHRLF AEIGPQYRNR PGGYTRILKL GPRKGDAAPM ALIELVEPAA EEVVAEATAA TRRSARDRVG RRSRAAEAPT APAEVAAGGA EPVAAVAEPV GSAAGTAEAP AAAPDETAGA EPAVAAAESP AAADAEAPAG AGAAAEEPEE KP
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