Gene Acel_0323 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0323 
Symbol 
ID4486109 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp338763 
End bp339362 
Gene Length600 bp 
Protein Length199 aa 
Translation table11 
GC content69% 
IMG OID639729090 
ProductSSU ribosomal protein S5P 
Protein accessionYP_872083 
Protein GI117927532 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0098] Ribosomal protein S5 
TIGRFAM ID[TIGR01021] ribosomal protein S5, bacterial/organelle type 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00179129 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGACGG CAGGACGTCG AGGCGGTGCG GCGAGTGAGC GACGCGAGCG TCGCGAGAGT 
CGCCGGCAAG AGGCCAGCCC CGAGAAGAGC AACTTTCTCG AGCGGGTCGT GACGATCAAT
AGGGTCGCCA AGGTCGTCAA GGGTGGACGG CGGTTCAGCT TCACGGCGCT CGTGGTCGTC
GGAGACGGCA ACGGCATGGT CGGTGTCGGG TACGGCAAGG CCCGCGAAGT GCCCGCCGCG
ATCGCGAAAG GCGTCGAGGA GGCGAAGAAG CACTTCTTCA CCGTTCCCCG GGTGCAAGGC
ACCATCCCGC ATCCGGTGAT CGGAGAAGCT GCCGCCGGGG TCGTCCTGCT GCGTCCGGCC
AGCCCGGGAA CCGGTGTGAT CGCCGGTGGC CCGGTGCGCG CGGTGCTGGA GTGTGCAGGG
GTGCGTGATG TGCTCTCCAA GTCGCTCGGC TCCGACAACG CGGTGAACAT CGTGCATGCG
ACGGTCAAGG CGCTGCGGGC GCTGGTCCCT CCCGAGAAGG TCGCGGTGCG ACGGGGACTC
CCGCTGGAAG AGGTGGCCCC ACCCGCACTC TTGCGGGCCA AGGCCGAGGC GGGGGTGTGA
 
Protein sequence
MATAGRRGGA ASERRERRES RRQEASPEKS NFLERVVTIN RVAKVVKGGR RFSFTALVVV 
GDGNGMVGVG YGKAREVPAA IAKGVEEAKK HFFTVPRVQG TIPHPVIGEA AAGVVLLRPA
SPGTGVIAGG PVRAVLECAG VRDVLSKSLG SDNAVNIVHA TVKALRALVP PEKVAVRRGL
PLEEVAPPAL LRAKAEAGV