Gene Acel_0315 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0315 
Symbol 
ID4486469 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp335444 
End bp335734 
Gene Length291 bp 
Protein Length96 aa 
Translation table11 
GC content63% 
IMG OID639729082 
ProductSSU ribosomal protein S17P 
Protein accessionYP_872075 
Protein GI117927524 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0186] Ribosomal protein S17 
TIGRFAM ID[TIGR03635] 30S ribosomal protein S17 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value0.000814875 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGAGCGAAC AGATCGAGCA GTCGACTGCA ACCAAGCCGC GGCGGGGAAT CCGCAAGGTC 
CGCGAGGGTG TCGTCGTCAG CGACAAGATG GACAAGACGA TCGTCGTTGC CGTTGAGGAC
CGGGTGAAGC ACCCGCTCTA CGGCAAGGTC ATGCGCCGAA CGAGCAAGTT GAAGGCGCAC
GACGAACAGA ACACCGCCAA AGTCGGCGAC CGGGTGCTCC TCATGGAGAC TCGGCCGCTT
TCGGCAACGA AACGGTGGCG GCTGGTCCGG ATCGTGGAGA GGGCCAAGTA G
 
Protein sequence
MSEQIEQSTA TKPRRGIRKV REGVVVSDKM DKTIVVAVED RVKHPLYGKV MRRTSKLKAH 
DEQNTAKVGD RVLLMETRPL SATKRWRLVR IVERAK