Gene Acel_0304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0304 
Symbol 
ID4486458 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp328542 
End bp329735 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content63% 
IMG OID639729071 
Productelongation factor Tu 
Protein accessionYP_872064 
Protein GI117927513 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.00273769 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
GTGGCGAAGG CGAAGTTCGA GCGGACCAAG CCCCACGTCA ACATCGGCAC CATTGGTCAC 
ATCGACCATG GCAAGACCAC CCTGACGGCG GCTATCACCA AGGTCTTGCA CGACCAGAAC
CCCGACATCA ACCCGTACAC GCCGTTCGAG CAGATCGACA AGGCGCCGGA AGAGCGGGCT
CGGGGCATCA CGATCTCGAT CGCGCATGTC GAGTACCAGA CGGAGAAGCG GCACTACGCA
CACGTCGACT GCCCGGGGCA CGCCGACTAC ATCAAGAACA TGATCACCGG TGCGGCGCAG
ATGGACGGTG CGATCCTCGT CGTCTCGGCG GCTGACGGTC CGATGCCGCA GACCAAGGAG
CACGTGCTTC TCGCCCGGCA GGTCGGCGTC CCCTACATCG TGGTGGCGCT GAACAAGGCT
GACGTGGTCG ACGACGAGGA GATCTTGCAG CTCGTCGAGC TTGAAGTGCG TGAACTGCTC
AACAGCTACG AATTCCCCGG GGACGACGTG CCGGTCGTCC GGGTCTCCGC GCTGAAGGCG
CTCGAGGGAG ATCCCAAGTG GACACAGTCG ATCCTCGACC TCCTCAAGGC GTGCGACGAC
TACATTCCCG AGCCAGTCCG GGAGATCGAC AAGCCGTTCC TCATGCCGAT CGAGGACGTC
TTCACGATCA CAGGCCGCGG TACGGTGGTC ACCGGACGTG TCGAGCGTGG TGTCGTCAAG
GTCGGTGACG AAGTCGAAAT CGTGGGCATC CACCCCAAGA CCCTGAAGAC CACGGTCACC
GGCGTCGAGA TGTTCCGCAA GCTTCTGGAC GAAGGCCGTG CCGGCGACAA CATCGGCGTC
CTGCTCCGCG GCATCAAGCG CGAAGAAGTC GAGCGGGGAC AGGTGGTCTG CAAGCCAGGC
AGCATCACCC CGCACACCGA ATTCGAGGCG CAGGTCTACG TGCTGTCCAA GGACGAAGGC
GGCCGGCACA CGCCGTTCTT CAACAACTAC CGGCCGCAGT TCTACTTCCG CACCACCGAC
GTCACCGGTG TCGTCCATCT CCCGGAGGGC ACCGAGATGG TCATGCCGGG CGACAACACG
GAAATGCGGG TGGAGCTCAT CCAACCGATC GCCATGGAGG AGGGGCTGCG GTTCGCCATC
CGTGAGGGTG GCCGGACCGT CGGCGCCGGC CGAGTGACGA AGATTCTCAA GTAG
 
Protein sequence
MAKAKFERTK PHVNIGTIGH IDHGKTTLTA AITKVLHDQN PDINPYTPFE QIDKAPEERA 
RGITISIAHV EYQTEKRHYA HVDCPGHADY IKNMITGAAQ MDGAILVVSA ADGPMPQTKE
HVLLARQVGV PYIVVALNKA DVVDDEEILQ LVELEVRELL NSYEFPGDDV PVVRVSALKA
LEGDPKWTQS ILDLLKACDD YIPEPVREID KPFLMPIEDV FTITGRGTVV TGRVERGVVK
VGDEVEIVGI HPKTLKTTVT GVEMFRKLLD EGRAGDNIGV LLRGIKREEV ERGQVVCKPG
SITPHTEFEA QVYVLSKDEG GRHTPFFNNY RPQFYFRTTD VTGVVHLPEG TEMVMPGDNT
EMRVELIQPI AMEEGLRFAI REGGRTVGAG RVTKILK