Gene Acel_0272 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0272 
Symbol 
ID4485848 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp288895 
End bp290199 
Gene Length1305 bp 
Protein Length434 aa 
Translation table11 
GC content65% 
IMG OID639729035 
ProductNADH-quinone oxidoreductase, F subunit 
Protein accessionYP_872032 
Protein GI117927481 
COG category[C] Energy production and conversion 
COG ID[COG1894] NADH:ubiquinone oxidoreductase, NADH-binding (51 kD) subunit 
TIGRFAM ID[TIGR01959] NADH-quinone oxidoreductase, F subunit 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones42 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTTTCC GGCTGACCCC TGTCTTGACG GCGACCTGGG GCACGGATCG GTCGTGGACG 
ATCGACGCGT ACCACCAGGC CGGCGGATAT CAGGCGTTGC GCAAGGCTCT CGCGATGAGT
CCGGACGCCG TGCTCCAACT GGTCAAGGAC TCCGGCCTGC GCGGCCGGGG CGGCGCCGGT
TTCCCCACAG GAATGAAGTG GGGATTCATC CCGCAGGGCG ACGGAAAGCC GCACTACCTC
GTCGTGAACG CTGACGAAAG TGAACCGGGG ACGTGCAAGG ACATTCCGCT GCTCATGGCC
ACCCCGCACA CCCTGATTGA AGGCGCGATT ATCGCCTCGT ATGCGATCCG GGCGCACCAG
GCCTTCATCT ACATCCGCGG CGAGGTCGTG CACGTCATCC GCCGGTTGCT GCGTGCGGTG
GAGGAGGCTC GCGCGGCGGG TTACCTGGGA CGGGATATTC TCGGCTCCGG CTTCGACCTC
GACATTACGG TGCACATTGG TGCCGGAGCG TACATTTGCG GGGAAGAGAC GGCTCTGCTG
GAATCGCTCG AAGGGTATCG CGGCCAGCCG CGGCTCCGCC CGCCGTTTCC CGCCACCGCT
GGGTTGTACG GCTGCCCGAC CGTCATCAAC AATGTCGAGA CGATCGCGAG CGTCCCGGCG
ATCGTCCGCG GCGGTGTCGA GTGGTACCGC TCGATGGGGA CGGAAAAATC CCCCGGATTC
AAGATTTTCT CGCTCTCCGG TCACGTCGCC CGGCCCGGCC AGTACGAGGC GCCGCTCGGA
ATCACCCTGC GTGAATTGCT GGACGCCGCC GGCGGCATGC GGGAGGGTCA CGAATTGAAA
TTCTGGACTC CCGGGGGTTC CTCGACCCCG CTCTTCACCG CGGAACACCT CGATGTCCCG
CTTGATTTTG AGGGACCGCC GCAGCACGGC TCGATGCTCG GCACCACCGC CCTGCAGATT
TTCGACGAGA CGACCTGCGT GGTCCGCGCC GTGAAGCGGT GGTGCGAGTT CTACGCGCAC
GAATCCTGCG GGAAATGCAC GCCGTGCCGG GAAGGCACGT TCTGGTACGC GCAGATTTTC
GACCGGCTGG AGAAAGGCCT CGGCACCGCT GAAGACATTG AGACCTTGCT CGATTTGTCG
GACAACATCC TTGGGCGGGC GTTCTGCGCC CTCGGCGACG GCGCAACCAG TCCGGTGACC
TCGTCGATTC AGTATTTCCG CGATGAGTAC ATCGCGCACT ACGAGCAGGG CGGCTGCCCG
TTTGACCCGG TGGCGTCGAC AGTTTTCGCG GGAGCGGGTG TCTGA
 
Protein sequence
MSFRLTPVLT ATWGTDRSWT IDAYHQAGGY QALRKALAMS PDAVLQLVKD SGLRGRGGAG 
FPTGMKWGFI PQGDGKPHYL VVNADESEPG TCKDIPLLMA TPHTLIEGAI IASYAIRAHQ
AFIYIRGEVV HVIRRLLRAV EEARAAGYLG RDILGSGFDL DITVHIGAGA YICGEETALL
ESLEGYRGQP RLRPPFPATA GLYGCPTVIN NVETIASVPA IVRGGVEWYR SMGTEKSPGF
KIFSLSGHVA RPGQYEAPLG ITLRELLDAA GGMREGHELK FWTPGGSSTP LFTAEHLDVP
LDFEGPPQHG SMLGTTALQI FDETTCVVRA VKRWCEFYAH ESCGKCTPCR EGTFWYAQIF
DRLEKGLGTA EDIETLLDLS DNILGRAFCA LGDGATSPVT SSIQYFRDEY IAHYEQGGCP
FDPVASTVFA GAGV