Gene Acel_0175 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0175 
Symbol 
ID4485488 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp183161 
End bp184780 
Gene Length1620 bp 
Protein Length539 aa 
Translation table11 
GC content64% 
IMG OID639728939 
Productmethionyl-tRNA synthetase 
Protein accessionYP_871936 
Protein GI117927385 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0143] Methionyl-tRNA synthetase 
TIGRFAM ID[TIGR00398] methionyl-tRNA synthetase 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value0.7084 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCAAGA CCTTCTACGT CACCACGCCG ATCTATTACG TCAACGACGC GCCGCACATC 
GGGCACGCCT ACACGACCGT GGCCGCTGAT GTTTTAGCGC GCTGGCACCG GCAGCGGGGC
GAGCCGGTCT GGTTCCTCAC CGGCACCGAT GAGCACGGTC AGAAGGTGCT CCGTAGTGCG
CAGGCCGGCG GGGCGTCCCC GCAGGAATGG GCCGATCGGC TGGTCGCGGA GGCGTGGCAG
CCGACGTGGC GTGAGCTGGA TATCTCCTAC GACGATTTCA TCCGCACCAC CGAGCCGCGG
CATACCGGTC GCGTGCAAGC GTTTCTCCAG CGCCTGTACG AAAAGGGCGA AATTTACGAA
GGCGTCTATG AGGGGCCTTA CTGTGTTGCG TGCGAGGAAT TCAAGCTCCC CGGTGAACTG
GTGTCCGGTG AGGGAGAATA TGCGGGTCAG CAGGTCTGCC CCGTTCACCG TCGTCCGGTC
GACCAGCTGA GTGAAACCAA TTACTTCTTC CGGTTATCCA AGTACGCCGA TGCGTTGCTG
GACCACTACG CCGCCCATCC GGAAGCGGTG GAGCCGGAGA GTGCGCGCAA CGAGGTGATG
CAGTTCATTC GGCAGGGGCT GCAGGATCTG TCGATTTCCC GGTCAAGTTT CGACTGGGGC
GTCAAGATTC CGTGGGACGA TCGGCAGGTC GTCTACGTCT GGTTTGACGC GCTTTTGAAT
TACATCACGG CGATCGGATA CGACGCTCCC GATGAGACGA TGCGGGCGCG CTTCGCATCG
ACGTGGCCTG CGGACGTCCA CCTTGTCGGC AAGGATATTC TGCGCTTTCA CGCCGTCATT
TGGCCGGCGA TGCTGCTCGC CGGCGGGCTG CCCCTTCCTC GCAAAGTATT CGCGCACGGT
TGGCTCCTCG TCTCCGGCGA GAAGATGAGC AAGACGCGGC TGACCGGCAT TGCGCCGACG
CAGCTGACGG CGCACTTCGG CTCGGACGCC TTCCGGTATT ACTTCCTCCG CTCGTTCCCG
TTCGGTCAGG ACGCCTCGTT CTCCTGGGAG GAGATGAGCG CCCGTTACAC CGCGGAACTT
GCCAATGGAT TGGGTAATCT CGCGTCCCGC GTCACGGCGA TGACCGGGCG GTACTTTGAC
GGCGTGCTGC CTGTTCCCGG CGAGGTGACG GCGGCGGAGC AGCGGGTCGC CGATGTGTTG
GCCGCGGTGG TTCCCGACGC GGACGCCGCG ATGGACCGGC TTGACTTTTT CACGGCCCTG
GCGCGCATTT GGGACCTCGT TCTCGTGCTC AATGGGTATC TCACCGAACA GCAGCCGTGG
CAGCTCGCGA AACAGGACGA CGGCGAGGCA CGCATCCGGC TGGCCACGGT GCTGTATACC
GCAGCGGACG GCTTGCGCGC ACTCGCGGTG CTTCTCAACG CCGTCATGCC TCGCGCGTGC
AGCCGGTTGT GGGAGCAACT CGGTGCGGAG GCAACTCTTG GGCCGCTGGG CAGCCAACGC
ATCTCCGACA CAGCCCGGTT CGGCGTCCTG CCGGCAGGAA GCCGGCTCAC CAAGCGTGAT
CCGCTCTTTC CCCGGCTGGC CGAGGACGCC TCCGGGGGGC AGGCCGAGAC ATCGTCATGA
 
Protein sequence
MTKTFYVTTP IYYVNDAPHI GHAYTTVAAD VLARWHRQRG EPVWFLTGTD EHGQKVLRSA 
QAGGASPQEW ADRLVAEAWQ PTWRELDISY DDFIRTTEPR HTGRVQAFLQ RLYEKGEIYE
GVYEGPYCVA CEEFKLPGEL VSGEGEYAGQ QVCPVHRRPV DQLSETNYFF RLSKYADALL
DHYAAHPEAV EPESARNEVM QFIRQGLQDL SISRSSFDWG VKIPWDDRQV VYVWFDALLN
YITAIGYDAP DETMRARFAS TWPADVHLVG KDILRFHAVI WPAMLLAGGL PLPRKVFAHG
WLLVSGEKMS KTRLTGIAPT QLTAHFGSDA FRYYFLRSFP FGQDASFSWE EMSARYTAEL
ANGLGNLASR VTAMTGRYFD GVLPVPGEVT AAEQRVADVL AAVVPDADAA MDRLDFFTAL
ARIWDLVLVL NGYLTEQQPW QLAKQDDGEA RIRLATVLYT AADGLRALAV LLNAVMPRAC
SRLWEQLGAE ATLGPLGSQR ISDTARFGVL PAGSRLTKRD PLFPRLAEDA SGGQAETSS