Gene Acel_0045 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0045 
Symbol 
ID4484540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp49736 
End bp50989 
Gene Length1254 bp 
Protein Length417 aa 
Translation table11 
GC content66% 
IMG OID639728807 
Productmajor facilitator transporter 
Protein accessionYP_871807 
Protein GI117927256 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2814] Arabinose efflux permease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones38 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCTGCGAA GCGCTGACAG GTCGAACAGC CTGCTCCGTC AGCCGCGCGC CGTATATGCG 
GTGGCGTTCG CCTGCGTCAT TTCCTTCATG GGGATCGGCC TCGTCGACCC GATCCTGCCT
GCGTTGGCGG CGAAACTCCA CGCCACCCCA AGCCAGGTGG AACTCCTCTT CACCTCATAT
CTCGTCATCA CCGCGGTCGC CATGCTCATT ACCGGCTGGG TGGCCGGCCG GCTCGGTTCG
AAGAACACGC TCCTGGTCGG CCTCGCGCTC GTCGTCATCT TCTCGGCTCT CGCCGGGGCG
AGTCGCACCA TCGGAGGGAT CGTCGGCTTC CGGGCCGGCT GGGGCCTGGG AAACGCGCTC
TTCATCGCGA CCTCGTTGGC GGTCATTGTC GCCTCGGCCG CGGGCGGCTT CGGGGCGGCC
ATCATTCTCT ACGAGACCGC CCTCGGCATC GGCATCGCCT CCGGACCGTT GCTGGGCGGA
CTGTTGGGCA ACGTCAGTTG GCGGGGGCCG TTCTTCGGTG TCGCCGTCCT CATGGCCGCC
GCGCTCGTCG CCACTCTCGT TCTCTTGCCG CCGACGCCGC GGCCTGCGGT GCGCAGCCGG
TTACGGGATC CGATCCTCGC GCTCGAGCAC GGACCCTTGG CGCGCGTGAG TCTGACCGGT
CTCTTTTACA ACTGGGGATT CTTCACCGTG CTCGGATACT CCCCGTTCCT GATGCACCTG
TCGGCGCTTG ACCTCGGCTG GGTGTTCTTC GGCTGGGGCG TACTAGTTGC AATCTTTGCC
ATCATCATTG CGCCGATGCT GCGGCGTCGC TTCGGTACCG CACCAACCCT GTACGTCAAT
TTGGCCTTGG TGGCCGTGGG CCTGCTGGTC ATCGGCGGCT GGGCGGCCCA TCCGCTCGTC
ATCATCGTGA CCGTCATCCT CTTCGGCTCA GTCGTCGGAA TCAACAACAC CCTCGTCACC
ACCGCGGTGA TGAGCGTGGC GCCGGTCCCC CGTCCGGTAG CCTCGGCTGC CTACGGTTTT
GTCCGTTTCA TCGGTGGCGG CCTGGCCCCG TACGTCGCCG GCAAGCTTGT CGAGCACGTC
GGCGTTCACG TGCCTTTTGT CATCGGCGCT GTCGTTGTGC TGGCTGGAAT CGTGAGCCTC
GCCGGCGCCC GTGATGCTCT CGACGCCGCT GATCGAAGTG ACGCCGTGCC CGCTGCGGCA
TCTGCTCCAG TGGTCGCGGC ACCGGTCGGC TGCCTGGAAC CCGGCGAATC CTGA
 
Protein sequence
MLRSADRSNS LLRQPRAVYA VAFACVISFM GIGLVDPILP ALAAKLHATP SQVELLFTSY 
LVITAVAMLI TGWVAGRLGS KNTLLVGLAL VVIFSALAGA SRTIGGIVGF RAGWGLGNAL
FIATSLAVIV ASAAGGFGAA IILYETALGI GIASGPLLGG LLGNVSWRGP FFGVAVLMAA
ALVATLVLLP PTPRPAVRSR LRDPILALEH GPLARVSLTG LFYNWGFFTV LGYSPFLMHL
SALDLGWVFF GWGVLVAIFA IIIAPMLRRR FGTAPTLYVN LALVAVGLLV IGGWAAHPLV
IIVTVILFGS VVGINNTLVT TAVMSVAPVP RPVASAAYGF VRFIGGGLAP YVAGKLVEHV
GVHVPFVIGA VVVLAGIVSL AGARDALDAA DRSDAVPAAA SAPVVAAPVG CLEPGES