Gene Acel_0006 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAcel_0006 
Symbol 
ID4484715 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidothermus cellulolyticus 11B 
KingdomBacteria 
Replicon accessionNC_008578 
Strand
Start bp6983 
End bp9487 
Gene Length2505 bp 
Protein Length834 aa 
Translation table11 
GC content64% 
IMG OID639728763 
ProductDNA gyrase subunit A 
Protein accessionYP_871768 
Protein GI117927217 
COG category[L] Replication, recombination and repair 
COG ID[COG0188] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), A subunit 
TIGRFAM ID[TIGR01063] DNA gyrase, A subunit 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones44 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACGCAGG ACACCACGCT TCCCCCCGAA GGCGGCCGGA TCGAACCGGT CGACCTTCAG 
GTGGAGATGC AGCGCAGTTA CCTCGACTAC GCGATGAGCG TCATCGTCGG GCGGGCGCTG
CCTGATGTCC GCGATGGTCT CAAGCCGGTG CATCGCAGGG TCCTGTATGC GATGTACGAC
GGTGGTTACC GCCCCGACCG GGGTTACGTC AAGTGCGCCC GGGTGGTCGG GGACGTCATC
GGGAGCTACC ACCCTCATGG CGATGCTGCG GTCTATGACA CGCTGGTACG GCTCGCCCAA
CCGTGGGTGA TGCGCCATCC TCTCGTCGAT GGGCAGGGAA ATTTCGGCTC GCCGGGTAAT
GACCCGGCGG CGGCGATGCG CTACACCGAG TGCCGCTTGA CACCCCTTGC CATGGAGATG
CTGCGGGACA TCGGGAAAGA AACCGTTGAC TTCGTCCCGA ATTACGACGG CCGCCAAATG
GAGCCGGTCA TTCTGCCGGC CCGGTTCCCG AACCTCCTGG TGAACGGATC CGCCGGCATC
GCCGTCGGCA TGGCGACCAA CATTCCGCCG CACAATCTGC GCGAAGTGGC GGCCGGCGCC
CAGTGGGCGC TGGAACATCC GGATGCGACC CGCGAAGAGC TCCTGGCTGC CTTGCTGGAG
CGGATCAAAG GCCCCGATTT CCCGACCGGG GGCGTCATCG TGGGACACGC TGGCATCGAA
GAGGCATACC GCACCGGCCG CGGCTCGATC GTGATGCGGG CCGTCGTCGA GGTCGAGGAA
GACGCCCGCG GCCGGCAGAG CCTCGTGGTC ACGCAACTTC CGTACCAGGT AAACCCGGAC
AATCTCGCGG TCCGTATCGC TGAATTGGTC TCGGAAGGAA GAATCCCGGG AATCGCGGAC
ATCCGCGATG ACTCGTCGTC CCGCACCGGC CAGCGGCTCG TCATCAGCCT CAAACGGGAC
GCCGTCCCCA AGGTTGTCCT CGCCAATCTG TACAAGCACA CGCAACTGCA GGACACCTTC
GGCGCGAACA TGGTCGCGCT CGTGGACAAT GTCCCGCGGA CGCTCTCCCT TGACGCGTTC
ATCCGGCACT GGGTGGCGCA TCAGATCGAC GTCATCGTCC GGCGGACCCG ATATGACCTC
CGCGAAGCGG AACGCCGGGC CCACATCCTC CGAGGCCTGG TCAAGGCGCT TGACCAACTG
GACGCCGTCA TCGCCCTCAT CCGCGGTTCC GCCTCTGCGG ACGAAGCCCG AAGCGGCCTC
ATGGAATTGC TCGACGTCGA CGAGGTGCAG GCAACCGCCA TTCTCGACAT GCAGTTGCGG
AAGTTGGCCG CGCTTGAACG CCAGGCCATC ATCGACGATC TGGCGAAGCA TGAGGCGGAG
ATCGCCGATC TCAACGACAT TCTCGCCAAC GAATCCCGGC AACGCGCGAT CGTCAGCGAG
GAACTCAAGG AAATCGTTGA CAAGTACGGC GATGAGCGGC GTACCGCCAT CGTGCCGGCG
GACGGCGACG TCAGCATCGA GGATCTCATT GCTGAAGAAG ACGTCGTCGT GACCATTACG
CGGGGCGGAT ACGCGAAACG CACAAAAACG TCCCTTTACC GTTCACAACG CCGCGGCGGT
AAAGGCATTC AGGGCGCCCA ATTACGGCAA GACGACGTTG TCGAGCATTT CTTCGTGACC
ACCACTCACC ACTGGCTGCT GTTCTTCACC GACAAGGGCC GGGTGTATCG CCTCAAGGCG
TACGAAATAC CGGAAGCGGC ACGGAGCGCG CGCGGGCAGC ACGTCGCGAA CCTCCTCGCG
TTCCAACCGG ATGAGAAAAT CGCCCAGGTC CTTGCCTTGC GGGATTACGA CGCCGCGCCG
TACCTCGTCC TTGCGACCCG ATCCGGATTG GTGAAGAAGA CCGCGTTACG GGAATTCGAC
TCCAATCGCA CCGGCGGCAT TATCGCGATC AATCTTCGCG ACGACGACGT CGTCATTGGC
GCACGACTCG TCTCCCCGGA CGACGAATTG CTGCTGGTGA GTCGGAAAGC GCAGGCCATC
CGCTTCCGGG CCGACGACGA GGCACTCCGG CCGATGGGGC GTGCGACGTC CGGTGTCATC
GGCATGCGGT TCCACGACGA CGACGCGCTT CTTGCCATGA TGGTCGTCCG TCCGCAGGCC
TACGTCTTCG TCGCGACGAC AAAGGGATAC GCAAAGCGGA CGCCGATCGA GGAGTATCCG
CTGCAGGGCC GCGGAGGATA CGGCGTCATC ACGGCGAAAA TCACAGCGGA GCGCGGGGAC
CTGGTCGGTG CCTTGATGGT CGACGAGGAG GACGAGGTGC TCGCGATAAC CGTACTGGGC
GGGGTGATCC GCACCCGGGT CTCCGAAGTA CGGCCGACGT CACGCGCAAC AATGGGCGTC
CGGCTCATGG ATCTCGCGGA GAACGACGCT CTGGTCGCCA TCACCAGAAA CGCCGAGCGG
GGCGGCGACG CCGGGATCGG CGAGGAGGAG TCACCGGCCC GCTGA
 
Protein sequence
MTQDTTLPPE GGRIEPVDLQ VEMQRSYLDY AMSVIVGRAL PDVRDGLKPV HRRVLYAMYD 
GGYRPDRGYV KCARVVGDVI GSYHPHGDAA VYDTLVRLAQ PWVMRHPLVD GQGNFGSPGN
DPAAAMRYTE CRLTPLAMEM LRDIGKETVD FVPNYDGRQM EPVILPARFP NLLVNGSAGI
AVGMATNIPP HNLREVAAGA QWALEHPDAT REELLAALLE RIKGPDFPTG GVIVGHAGIE
EAYRTGRGSI VMRAVVEVEE DARGRQSLVV TQLPYQVNPD NLAVRIAELV SEGRIPGIAD
IRDDSSSRTG QRLVISLKRD AVPKVVLANL YKHTQLQDTF GANMVALVDN VPRTLSLDAF
IRHWVAHQID VIVRRTRYDL REAERRAHIL RGLVKALDQL DAVIALIRGS ASADEARSGL
MELLDVDEVQ ATAILDMQLR KLAALERQAI IDDLAKHEAE IADLNDILAN ESRQRAIVSE
ELKEIVDKYG DERRTAIVPA DGDVSIEDLI AEEDVVVTIT RGGYAKRTKT SLYRSQRRGG
KGIQGAQLRQ DDVVEHFFVT TTHHWLLFFT DKGRVYRLKA YEIPEAARSA RGQHVANLLA
FQPDEKIAQV LALRDYDAAP YLVLATRSGL VKKTALREFD SNRTGGIIAI NLRDDDVVIG
ARLVSPDDEL LLVSRKAQAI RFRADDEALR PMGRATSGVI GMRFHDDDAL LAMMVVRPQA
YVFVATTKGY AKRTPIEEYP LQGRGGYGVI TAKITAERGD LVGALMVDEE DEVLAITVLG
GVIRTRVSEV RPTSRATMGV RLMDLAENDA LVAITRNAER GGDAGIGEEE SPAR