Gene Shewana3_4121 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4121 
Symbol 
ID4480338 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4953216 
End bp4954643 
Gene Length1428 bp 
Protein Length475 aa 
Translation table11 
GC content48% 
IMG OID639728739 
Product4Fe-4S ferredoxin iron-sulfur binding domain-containing protein 
Protein accessionYP_871744 
Protein GI117922552 
COG category[C] Energy production and conversion 
COG ID[COG0348] Polyferredoxin 
TIGRFAM ID[TIGR02745] cytochrome c oxidase accessory protein FixG 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00370058 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.702113 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACGCAG AATCTAATAA CAAGGACTAT TCGAAAACCA ATCGAATTAA GATTCACCAG 
CCAGATGCAG ATAAGGCTGA TCGCTTTAAC CCCCGCAACC GGATTTATGT CCGGGCCATC
GATGGATTAT GGAGTAGCGT ACGCCGCCGT ATGGGCTGGG TCGCAATGCT CTTCTTCCTT
ATCTTACCTT GGATCCCTTG GGGAGACCGT CAAGCCGTTT GGTTCAATCT GGCAGAGCAG
AAGTTCCATG TCTTTGGTTT AACGATTTGG CCACAGGATC TGACCTTACT TGCCGCTCTC
TTTATGATAG CCGCCTTTGC GTTATTTTTC GTGACAACCT ATCTCGGCCG AGTCTGGTGT
GGTTACACCT GTCCGCAAAC CGTATGGACG TTTATGTTCA TCTGGTTCGA AGAAAAACTC
GAAGGTGCCC GTAATAAGCG CATTAAGTTA GATCAAATGC CATGGGGTTT CGACAAAATC
TGGCGCAAAA CGGCAAAACA TACCGCATGG ATTGTGCTTT CGCTCATCAC GGCTATGACC
TTTGTGTCCT ATTTTGTGCC GAGCCGTGAA GTCTATGTCG ACGTATTTAC CCTTAATGCA
TCGGGTGCGA TCTACTTCTG GGTTATCTTT TTTACCTTAG CGACCTACGG TAATGCGGGT
TGGATGCGTG AAATCATGTG TATCCATATG TGCCCGTACG CGCGTTTCCA ATCGGCGATG
TTTGATAAAA ACACCTATAT CGTTGGTTAC GATGCCAAAC GCGGCGAGAC CCGCGGCCCG
CGCTCACGCA AAGCCGACCC CAAAGAAATG GGCTTAGGCG ACTGTATCGA CTGCGACCTC
TGTGTCCAAG TTTGCCCAAC GGGCATCGAT ATTCGTAACG GCTTGCAATA CGAATGTATT
AACTGCGGCG CCTGTATTGA CGCTTGTGAT CAAACCATGG AGCGCATGGG ATACCCTCTG
GGGCTGATTA GCTATACCAC CGAAAATAAA CTCGAAGGTA TTAAAGAGAA AGTATTACGT
CCTAAGCTGG TGGGCTATGG TGTGGTGTTA GCCGCGATGA TCCTGATCTT TATCTATGCG
AGCGCGACGA TTGCCCCCGT GCGCATGGAT ATCATCCGTG ACCGTAACCA ACTCTATAGA
GAAAACAATC AAGGGCTGAT TGAAAACACC TTCACCCTGA AAATTCTCAA CAAGACAGAA
CAAGCCCATG AATACACTAT GAGTGTTGAA GGTCTCAACA ACTATAAGTG GTATGGACCA
ACCTCAGTGA CGATTGCGGG TGGAGAAGTA TTAACTCTAC CTATCAGTGT TGGGGTCGAT
CCGGTCGAAC TTTCGCGTTC AGTGACTAAC ATTGAGATAA AAGTGAAAAC CCATATCGAT
GGCGAAGAAG TCGAAGTCGA GCAAGAATCG CGATTCTTCA GTCCATAG
 
Protein sequence
MNAESNNKDY SKTNRIKIHQ PDADKADRFN PRNRIYVRAI DGLWSSVRRR MGWVAMLFFL 
ILPWIPWGDR QAVWFNLAEQ KFHVFGLTIW PQDLTLLAAL FMIAAFALFF VTTYLGRVWC
GYTCPQTVWT FMFIWFEEKL EGARNKRIKL DQMPWGFDKI WRKTAKHTAW IVLSLITAMT
FVSYFVPSRE VYVDVFTLNA SGAIYFWVIF FTLATYGNAG WMREIMCIHM CPYARFQSAM
FDKNTYIVGY DAKRGETRGP RSRKADPKEM GLGDCIDCDL CVQVCPTGID IRNGLQYECI
NCGACIDACD QTMERMGYPL GLISYTTENK LEGIKEKVLR PKLVGYGVVL AAMILIFIYA
SATIAPVRMD IIRDRNQLYR ENNQGLIENT FTLKILNKTE QAHEYTMSVE GLNNYKWYGP
TSVTIAGGEV LTLPISVGVD PVELSRSVTN IEIKVKTHID GEEVEVEQES RFFSP