| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shewana3_4120 |
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| Symbol | |
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| ID | 4480334 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella sp. ANA-3 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008577 |
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| Strand | - |
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| Start bp | 4944939 |
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| End bp | 4947389 |
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| Gene Length | 2451 bp |
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| Protein Length | 816 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639728735 |
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| Product | diguanylate phosphodiesterase |
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| Protein accession | YP_871743 |
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| Protein GI | 117922551 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2200] FOG: EAL domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTTCGCA AACTCTCGCT CGCAGTATTG ATACCTGTCT GCATGCTGGC ACTTTATTTA
GTGTTGGTTA CGGCTGAGTA TTTCTATGAG AGCGAGCTGG TACGTAATGA ACTGGCTGAT
CGCCAAGTGA GCCAGATAAA GCAGCAACTT TTACGTATGC AAACGATAGT GCAGTCGGCG
CAAGCGTTAC AAGATGTTGA ACGTATCGAG CAGGAAGTCT CTCTGGCTAC CTTAGATATG
AATGTCATGG TTTATATCTT GCTGGATGCA AATAGTCGCA TTCGCTTTGC GAATCATACT
GTTTGGCGTG ATAGCAATGC CATTGAAGTG ATTGATGGTT ACGATGTGGT CCGGCATCAT
GCCGTGGTGC AATCTGGACA GGCGAGTGTT TCAATAAATC CAGACCGATT ATCGATTCAA
GCCTATTATC CCGTCGATGC TCAATATCCT GGAGCGACAG AGCTTATCTA TCTTGAGTCT
GATCTCGCGC CGTTAGTGGC TAAAGCTTCA ACCGAATTAC AACAACGATT TATGCGTGTA
TGGGGGCTCG GAGCGCTGCT GTTAATCGGT TTCACCTTTG TTTTATATTA CCTCTTGATC
CGTCCATTCA AGATGTTAAG CGAATCGGCA AAGCATGTAG GCACTCCCGA GTTTTCGACC
CAAGTGCCTT GGAGTGCCTC CGAGGTCTTG TCTCTACAAA CGACACTGCA GCAGGTGCAT
GAACATCTAG GGCGTGCAGT TAAGCAGCTT AACGATAGTG AGCAACGTTG GTTGTTTGCG
GTTGAAGGTT CACGCAATGG GATCTGGGAT TGGAATATTC GTTCTGGCGA AGTGTTTCTT
TCTGATCGTT GGAAGGAAAT GATTGGTTAT CAACCCGATG AGCTAGAGGA AGTGTTCCAG
ACCTGGGAAA CGCGTTTGCA TCCTGATGAT AAGCAAGCCG TGTTGGACTG CCTGCAAGAG
TATGTCAGCG GCAAGACTAA AGAATTTGAG AGTGTCCATC GCTTACAACA TAGAGATGGG
CATTATGTTT GGGTATTTGA CCGTGGCATG TTAGTCGACT GGGATCACCT TGGTCGACCG
ACTCGGATGA TCGGTATTCA TGTCGATGTC TCTGAGAGTG AGCGAAACCA TGCTGCGATT
GCCGAATTAG TGAAGCAATC TGTGGCAGGG CCTAAGATGC TCCCCGAAAC CTTTATGGCG
CAGTTATCCC AATACCTTAA TCAGCGAACC AGTGCGGGGT ATTGGGGGGC TTTGTTATTA
CTCAATGTCG AAACCCTTGG AGCGAATGGC ACTCTTACAT CCCATGAGCT TGAGCGATTG
TTGTCGCAAT TAAGTGCAAG GCTTTCAAGT TATTTTGCTG AAAATATTGT CGTTGCTCAT
CTCGAATTGG GCCGGTTCGC CTTGTTAGCT AAGGAGTTGG CTGCCGATGC TAATATGGCC
GGACGTCGAG CCTTGGCGTT GGCTACTGAG CTTAAACAAA TCGCCACTCG TCCCTTCCAT
TATGGTGAAC ATGATTTTCG TTTAAATGCG AATATTGGGA TTTGCTTATT AGATTCTGTG
GATACGTTGG CGTCAGAACT CGCCGTGCGA CGTGCCGAAC TGGCGATGCA GCATGCTCAG
TCTAGTGAAC ACGCAGGTTG CGCTTTCTAT CACCCAGATT TAGAACGCTC GCAGGATCCT
GAGTCGTCTT TATTGAACAG ATTAGAGCGT GCGATAGCTG AAAATCAGTT GTCGTTAATG
TTCCAGCCAG TGGTGGATAT GCAAGGCAAG ATAGTGTCGG CCGAGGTTCT GTCTCGCTGG
CATTTAGCGG ATGGGGAAAT TGTCCCGGTC GCTAAATTTA TTGATTTAGC CGAGCGCCAT
GGCTTGATTG CATCGCTCGA TTTAAATGTG GCTACGCGCG TTTGCCAGTT GATTAAGCAA
TTTAAACAGC AGGGTATTAA CCTGCCACGT TTAACTTTGA ATATTAGTAC CTTATCTTTC
TGCCAGGCTG AATTTGTCGA GCAATTGGTT GCATTAACCC GTCGCTACGA GCTGGATGAC
AATCAGCTGG GAATTGAGTT AACCGAGAGT GCATTACTAA CATCAGCCTC CTTTATTCTG
CCGAGGATCA GTCTGCTCGC TGAGGCTGGG GTTGCGCTAA CATTAGATAA CTTTGGTGCG
GGACAGGGCG CCTTGAGTTG CTTGCGTCAC TATCCCTTGC GTGAGGTGAA GCTCGATTTA
CATTGTGCCG CCAATTTAAC GAATGATGCG AGCTGGAGCC AAGCGCTGAT TCAGTCGGTA
CACCCCTTTA ACTTGCCTAT CGTGGCCAAA GGTGTCGAAT CACCGCAGCA ACAACAGCTA
TTTAGCCGCT TAGGTTGTAC CCACTTCCAA GGCTACAATA TTGCTCGCGC CTTAAGTGTT
AATGACTTTA AACAGCTTGT TTGTCCACGT CCCTTGTTGC GTAGCGTTTA A
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| Protein sequence | MLRKLSLAVL IPVCMLALYL VLVTAEYFYE SELVRNELAD RQVSQIKQQL LRMQTIVQSA
QALQDVERIE QEVSLATLDM NVMVYILLDA NSRIRFANHT VWRDSNAIEV IDGYDVVRHH
AVVQSGQASV SINPDRLSIQ AYYPVDAQYP GATELIYLES DLAPLVAKAS TELQQRFMRV
WGLGALLLIG FTFVLYYLLI RPFKMLSESA KHVGTPEFST QVPWSASEVL SLQTTLQQVH
EHLGRAVKQL NDSEQRWLFA VEGSRNGIWD WNIRSGEVFL SDRWKEMIGY QPDELEEVFQ
TWETRLHPDD KQAVLDCLQE YVSGKTKEFE SVHRLQHRDG HYVWVFDRGM LVDWDHLGRP
TRMIGIHVDV SESERNHAAI AELVKQSVAG PKMLPETFMA QLSQYLNQRT SAGYWGALLL
LNVETLGANG TLTSHELERL LSQLSARLSS YFAENIVVAH LELGRFALLA KELAADANMA
GRRALALATE LKQIATRPFH YGEHDFRLNA NIGICLLDSV DTLASELAVR RAELAMQHAQ
SSEHAGCAFY HPDLERSQDP ESSLLNRLER AIAENQLSLM FQPVVDMQGK IVSAEVLSRW
HLADGEIVPV AKFIDLAERH GLIASLDLNV ATRVCQLIKQ FKQQGINLPR LTLNISTLSF
CQAEFVEQLV ALTRRYELDD NQLGIELTES ALLTSASFIL PRISLLAEAG VALTLDNFGA
GQGALSCLRH YPLREVKLDL HCAANLTNDA SWSQALIQSV HPFNLPIVAK GVESPQQQQL
FSRLGCTHFQ GYNIARALSV NDFKQLVCPR PLLRSV
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