Gene Shewana3_4114 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4114 
Symbol 
ID4480328 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4938058 
End bp4938612 
Gene Length555 bp 
Protein Length184 aa 
Translation table11 
GC content46% 
IMG OID639728729 
Producthypothetical protein 
Protein accessionYP_871737 
Protein GI117922545 
COG category[S] Function unknown 
COG ID[COG3078] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCTCGTA GCAAGAAAAC ACGCAAGGGC GGCGAGAATA GCCCTAAATT ACAGCCAAGA 
GTGAAAAAGC AGGACCGTGC AGAAGTCACT GGCAAGCGCG CCGAAAAGGG CAACAAGTCT
GGCAGTCGTC ATAATGAGGC GCTGATCCAG GCTCAAGCAC CACAGAAAAA GGCTGCACAG
AAGAAAGATC CTCGCCATGG CAGCAAAAAG CCTGTGGCAT TGGCTTTACC AACTGCAACA
GAAAAACCTG CCACACCAAA GGTTAAGCAA CCCAAGTTAA CCGACGAGCA AAAACTGTTG
AAGTTAGAAG AAGATCCAAG ACTGAACCAG TTACTCGATA TGCTGGAAGA AGGCCGTAAC
TTAAGCAATG ACGACCAACA ATGGTTAGAT CAGCAGCTGA ACAAGATTGA AGCCCTGATG
ATTAAACTGG GTATCAGCGA TGAGTTAGAA GATGAAGCGC CAGCGAAAAA ATCTAAAGTC
GATTCAGATG ATGACCTGTT CGATCGCTTT GAATCCGGTG CCGACCTACT AAAAGATTAT
CAAGATAAGT TTTAA
 
Protein sequence
MSRSKKTRKG GENSPKLQPR VKKQDRAEVT GKRAEKGNKS GSRHNEALIQ AQAPQKKAAQ 
KKDPRHGSKK PVALALPTAT EKPATPKVKQ PKLTDEQKLL KLEEDPRLNQ LLDMLEEGRN
LSNDDQQWLD QQLNKIEALM IKLGISDELE DEAPAKKSKV DSDDDLFDRF ESGADLLKDY
QDKF