Gene Shewana3_4111 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4111 
Symbol 
ID4480325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand+ 
Start bp4935890 
End bp4936513 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content46% 
IMG OID639728726 
Productcytochrome c, class I 
Protein accessionYP_871734 
Protein GI117922542 
COG category[C] Energy production and conversion 
COG ID[COG2863] Cytochrome c553 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.148177 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.590499 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGT TAGCTCTTGC GCTGTCTGTT GTAGTTGCCG CCATATCTTC ACCTGCGATT 
GCTGAAGGTA ATGCTGAAGC GGGAAAAACT AAAATTATCG TTTGTTCTGC ATGTCACGGC 
ATGGACGGTA ACAGTATGAT CGATATGTAC CCTAAGCTTG CGGGCCAACA CGCCACATAC 
CTCCAAAAGC AACTACATGA TTTCCGTAGT GCGGCGCAAT CTGGCGGTAA AGATGGTCGT 
ATGGATCCTA TCATGAGTGG TATGGCAATG CCTCTAAGCG ATCAAGATAT TCTTGATATC 
AGCGCTTATT TCTCTAGCCA AGCAATCCAA GTTGCTGAAG CGAAAGATGT TCCTGAGCTA 
GGTGCAAAAC TTTACAAAGG TGGCGATGTA TCACGCGGCA TCACAGCTTG TATGGCATGT 
CATGGTCCAG ATGCTAAAGG TGCTGAATCA GCAGGTTTCC CTGCATTAGC CGGTCAACAC 
GCTAACTACA TCAAGATCCA ACTGACTAAG TTCCGTGATG CAGGTCGCCA CAACGACCTC 
AACGGCATGA TGCAAGATGT CGCGAAAAAG TTAAGCGACA GTGATATCGA AGCATTATCT 
AAGTACATTG CTAGCCTGAA ATAG
 
Protein sequence
MKKLALALSV VVAAISSPAI AEGNAEAGKT KIIVCSACHG MDGNSMIDMY PKLAGQHATY 
LQKQLHDFRS AAQSGGKDGR MDPIMSGMAM PLSDQDILDI SAYFSSQAIQ VAEAKDVPEL 
GAKLYKGGDV SRGITACMAC HGPDAKGAES AGFPALAGQH ANYIKIQLTK FRDAGRHNDL 
NGMMQDVAKK LSDSDIEALS KYIASLK