Gene Shewana3_4110 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4110 
SymbolengB 
ID4480324 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4935061 
End bp4935720 
Gene Length660 bp 
Protein Length219 aa 
Translation table11 
GC content47% 
IMG OID639728725 
Productribosome biogenesis GTP-binding protein YsxC 
Protein accessionYP_871733 
Protein GI117922541 
COG category[R] General function prediction only 
COG ID[COG0218] Predicted GTPase 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR03598] ribosome biogenesis GTP-binding protein YsxC/EngB 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.147474 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.44318 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACTGAAT CTCATATAGA TTTTCGCAGG GCGAAGTTTT TAATCAGTGC ACCTGACATT 
GCACATTTGG ATCAATATCT GCCCGGCGAC GTTGGTGTTG AGATTGCTTT TGCTGGTCGC
TCCAATGCCG GAAAATCGAG TGCGCTCAAT GCATTAACTG AGCAGAAAAA CTTAGCGCGT
ACCAGTAAAA CCCCGGGGCG AACTCAGCTA ATTAACGTAT TTGAACTCGA TGCGCAGCGC
CGATTAGTCG ATTTACCGGG TTACGGCTTT GCCCAAGTGC CTTTAGCCAT GAAATTAAAG
TGGCAACAAT CCCTCGGCGA ATATTTGCAG AAGCGTGCGT GCTTAAGTGG CGTTGTGGTA
TTGATGGATA TTCGTCATCC GTTGAAAGAT TTGGATATGC AGATGATCGA ATGGGCGGTT
GCGAGTGAAA TTCCAGTACT CGCATTACTG ACTAAGTCCG ATAAATTGGC GCAAAGCGCG
AAGATGAAAA CCGTGAACGA AGTGCGTAAA GCGCTGGTTG AATTTGGTGA TTGGGTACAG
GTTGAGCCTT TTTCTGCGCT CAAAGGCACG GGCAAACCTA AAGTGCTGAG TATTCTAAAT
GAATGGTGTC ATCCGCAATG GTTGGCCGAT GAGTTAGAAA ACCAAGACGA CGCCGAGTAA
 
Protein sequence
MTESHIDFRR AKFLISAPDI AHLDQYLPGD VGVEIAFAGR SNAGKSSALN ALTEQKNLAR 
TSKTPGRTQL INVFELDAQR RLVDLPGYGF AQVPLAMKLK WQQSLGEYLQ KRACLSGVVV
LMDIRHPLKD LDMQMIEWAV ASEIPVLALL TKSDKLAQSA KMKTVNEVRK ALVEFGDWVQ
VEPFSALKGT GKPKVLSILN EWCHPQWLAD ELENQDDAE