Gene Shewana3_4073 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShewana3_4073 
Symbol 
ID4480287 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella sp. ANA-3 
KingdomBacteria 
Replicon accessionNC_008577 
Strand
Start bp4895133 
End bp4895786 
Gene Length654 bp 
Protein Length217 aa 
Translation table11 
GC content50% 
IMG OID639728688 
Producthypothetical protein 
Protein accessionYP_871696 
Protein GI117922504 
COG category[S] Function unknown 
COG ID[COG1738] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00697] conserved hypothetical integral membrane protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.000000180741 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAACCC CTGCGCAGCT TCGCCGCGCA CTCCTGCTAT TAGTGGGATT TCACATACTG 
ATTATTTGCG TCAGCAACTA CTTGGTACAA CTACCGTTTC AATTGTTTGG TTTTCACACC
ACTTGGGGCG CGTTTAGTTT TCCCTTTGTC TATCTGGCGA CCGATCTCAC CGTGCGCATC
TTTGGACAAA CACCTGCCCG TAGCATCATT CTCAAAGCCA TGGTGCCCGC GTTGATGATT
TCCTATGTCA TGGGTGTGGT ATTCCATCAA GGCAGCTTCC AAGGGATTGA TTCCTTAAGC
CAATGGAACA CTTTTGTGTT TCGCATCGCC TTCGCCAGCT TCGCGGCGTA TTTGATTGGT
CAACTGATGG ATATCACAGT CTTTGCTCGC CTACGCCAGA GCCGTTCTTG GTGGGTCGCG
CCTGCGGCAT CGACCATTGT CGGTAACTTA GTCGACACCT TAGTGTTCTT CAGTGTCGCT
TTTTATGCCT CAACAGACAG CTTTATGGCG GCCAACTGGC CCGAAATCGC GGCCGTGGAT
TACAGCTTCA AATTACTCGT GAGCTTAGGG TTATTCCTGC CCGCCTACGG CGTCCTGCTG
AAGGTCTTAC AAGACAAGAT CTTGCAAACC AGTCCACAAA AATCATTTTC CTGA
 
Protein sequence
MLTPAQLRRA LLLLVGFHIL IICVSNYLVQ LPFQLFGFHT TWGAFSFPFV YLATDLTVRI 
FGQTPARSII LKAMVPALMI SYVMGVVFHQ GSFQGIDSLS QWNTFVFRIA FASFAAYLIG
QLMDITVFAR LRQSRSWWVA PAASTIVGNL VDTLVFFSVA FYASTDSFMA ANWPEIAAVD
YSFKLLVSLG LFLPAYGVLL KVLQDKILQT SPQKSFS